| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g08969 | 4:13,218,956-13,221,228 | + | C2H4g25025 | CX4g036238 | LOC_Os04g27990 | Os04g0346900 | - | Detail |
| C1H4g15107 | 4:13,225,358-13,232,659 | + | C2H4g18236 | CX4g033642 | LOC_Os04g28010 | Os04g0347600 | - | Detail |
| C1H4g05294 | 4:13,237,937-13,242,997 | - | - | - | - | - | - | Detail |
| C1H4g03410 | 4:13,478,427-13,482,579 | - | C2H6g18608 | CX6g044432 | - | Os12g0632401 | - | Detail |
| C1H4g19418 | 4:13,536,308-13,543,244 | + | C2H4g16562 | CX4g032157 | LOC_Os04g28020 | Os04g0347800 | PRD1 | Detail |
| C1H4g22332 | 4:13,551,105-13,556,761 | + | C2H4g25578 | CX4g033951 | LOC_Os04g28040 | Os04g0347900 | - | Detail |
| C1H4g13797 | 4:13,559,425-13,564,556 | + | C2H4g20901 | CX4g033086 | LOC_Os04g28050 | Os04g0348000 | - | Detail |
| C1H4g24314 | 4:13,563,743-13,566,873 | - | C2H4g08837 | CX4g034188 | LOC_Os04g28060 | Os04g0348100 | - | Detail |
| C1H4g16463 | 4:13,574,904-13,582,287 | + | C2H4g13837 | CX4g035633 | LOC_Os04g28090 | Os04g0348300 | - | Detail |
| C1H4g18035 | 4:13,586,454-13,589,500 | - | C2H4g14798 | CX4g036157 | LOC_Os04g28100 | Os04g0348400 | OsPUB7 | Detail |
| C1H4g07136 | 4:13,598,759-13,601,214 | + | C2H4g14319 | - | LOC_Os04g28120 | Os04g0348600 | - | Detail |
| C1H4g27011 | 4:13,610,302-13,613,546 | + | C2H4g18470 | - | LOC_Os04g28130 | Os04g0348800 | - | Detail |
| C1H4g23299 | 4:13,626,130-13,629,312 | + | C2H4g29280 | - | LOC_Os04g28160 | Os04g0348800 | - | Detail |
| C1H4g18144 | 4:13,635,805-13,639,280 | - | C2H4g00376 | CX4g035408 | LOC_Os04g28170 | Os04g0349401 | - | Detail |
| C1H4g07697 | 4:13,641,848-13,643,962 | - | C2H4g26754 | CX4g032516 | LOC_Os04g28180 | Os04g0349500 | - | Detail |
| C1H4g08997 | 4:13,661,222-13,666,019 | - | C2H4g11001 | CX4g034310 | LOC_Os04g28210 | Os04g0349700 | - | Detail |
| C1H4g05397 | 4:13,678,190-13,680,673 | + | C2H4g17175 | CX4g034236 | LOC_Os04g28234 | Os04g0350000 | - | Detail |
| C1H4g22441 | 4:13,698,927-13,706,233 | + | C2H4g23045 | CX4g035357 | LOC_Os04g28260 | Os04g0350300 | - | Detail |
| C1H4g22936 | 4:13,724,316-13,727,239 | - | C2H4g11650 | CX4g032228 | LOC_Os04g28280 | Os04g0350700 | AN1, An-1, OsbHLH093, RAE1, An-1/RAE1, RAE1/An-1, Awn4-2 | Detail |
| C1H4g19111 | 4:13,731,769-13,732,047 | + | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019609 | 2:16,514,076-16,517,769 | - | C1H2g25610 | C2H2g13549 | LOC_Os02g28720 | Os02g0488600 | - | Detail |
| CX2g021322 | 2:16,520,565-16,520,738 | - | - | - | - | Os02g0188201 | - | Detail |
| CX2g019939 | 2:16,553,083-16,555,412 | + | C1H2g24376 | C2H2g09159 | LOC_Os02g28810 | Os02g0489400 | - | Detail |
| CX2g021075 | 2:16,557,474-16,558,445 | + | C1H2g28295 | C2H2g07433 | LOC_Os02g28820 | Os02g0489500 | - | Detail |
| CX2g022951 | 2:16,561,767-16,573,515 | - | C1H2g07614 | C2H2g29338 | LOC_Os02g28830 | Os02g0489550 | - | Detail |
| CX2g022326 | 2:16,585,463-16,585,615 | - | - | - | - | Os02g0630650 | - | Detail |
| CX2g022420 | 2:16,590,781-16,598,493 | + | C1H2g03753 | C2H2g10751 | LOC_Os02g28850 | Os02g0489800 | - | Detail |
| CX2g020775 | 2:16,601,228-16,601,458 | + | C1H2g18528 | C2H2g28147 | - | - | - | Detail |
| CX2g024603 | 2:16,602,425-16,605,588 | + | C1H2g12378 | C2H2g14694 | LOC_Os02g28870 | Os02g0490000 | OsPUB73 | Detail |
| CX2g021351 | 2:16,617,355-16,617,679 | - | - | - | - | - | - | Detail |
| CX2g020830 | 2:16,621,181-16,623,243 | + | C1H2g31655 | C2H2g19151 | LOC_Os02g28900 | Os02g0490500 | - | Detail |
| CX2g022060 | 2:16,628,219-16,629,823 | - | C1H2g05275 | C2H2g16996 | LOC_Os02g28900 | Os02g0490500 | - | Detail |
| CX2g020042 | 2:16,632,136-16,632,828 | + | - | C2H2g26220 | - | - | - | Detail |
| CX2g024900 | 2:16,651,161-16,652,734 | + | C1H2g10622 | C2H2g25066 | LOC_Os02g28900 | Os02g0490500 | - | Detail |
| CX2g019249 | 2:16,675,004-16,675,156 | - | - | - | - | Os09g0414600 | - | Detail |
| CX2g019058 | 2:16,675,836-16,677,566 | + | - | - | LOC_Os02g28970 | Os02g0491300 | MTR1 | Detail |
| CX2g022120 | 2:16,681,986-16,686,085 | - | C1H2g23595 | C2H2g22171 | LOC_Os02g28980 | Os02g0491400 | rFKBP75 | Detail |
| CX2g019698 | 2:16,690,462-16,691,270 | - | C1H2g19165 | C2H2g20082 | LOC_Os02g29000 | Os02g0491600 | - | Detail |
| CX2g023919 | 2:16,692,694-16,693,454 | + | C1H2g09173 | C2H2g19644 | LOC_Os02g29010 | Os02g0491700 | - | Detail |
| CX2g020216 | 2:16,700,877-16,701,548 | + | C1H2g19642 | C2H2g23220 | LOC_Os02g29020 | Os02g0491800 | - | Detail |