| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g26347 | 12:1,987,107-1,987,328 | + | C2H11g12348 | CX12g016356 | LOC_Os12g04924 | Os12g0143100 | - | Detail |
| C1H12g23605 | 12:1,987,383-1,992,947 | + | C2H12g17505 | CX12g015488 | LOC_Os12g04930 | Os12g0143200 | OsASHL1 | Detail |
| C1H12g20952 | 12:1,995,364-1,995,699 | - | C2H12g04572 | CX12g018267 | LOC_Os12g04934 | Os12g0143300 | - | Detail |
| C1H12g29028 | 12:1,997,289-2,001,884 | - | C2H12g15233 | CX12g016016 | LOC_Os12g04940 | Os12g0143400 | - | Detail |
| C1H12g04669 | 12:2,003,442-2,006,621 | - | C2H12g15233 | CX11g014000 | LOC_Os12g04940 | Os12g0143400 | - | Detail |
| C1H12g22085 | 12:2,008,410-2,008,969 | - | C2H12g29588 | - | - | - | - | Detail |
| C1H12g20218 | 12:2,021,107-2,024,830 | - | C2H12g30125 | CX12g015864 | LOC_Os12g04980 | Os12g0143800 | DMC1A, OsDMC1A, OsDmc1A, Dmc1A, DMC1, OsDMC1, RiLIM15A | Detail |
| C1H12g18494 | 12:2,026,187-2,033,815 | + | C2H12g21227 | CX12g016038 | LOC_Os12g04990 | Os12g0143900 | - | Detail |
| C1H12g14180 | 12:2,036,614-2,039,947 | + | C2H12g14580 | CX12g018054 | LOC_Os12g05000 | Os12g0144000 | - | Detail |
| C1H12g00146 | 12:2,042,619-2,046,522 | + | C2H12g26458 | CX12g015780 | LOC_Os12g05020 | Os12g0144200 | - | Detail |
| C1H12g05256 | 12:2,060,087-2,062,513 | + | C2H12g10724 | CX12g018220 | LOC_Os12g05040 | Os12g0144600 | - | Detail |
| C1H12g22183 | 12:2,089,272-2,092,419 | - | C2H12g16995 | CX12g015697 | LOC_Os12g05050 | Os12g0145100 | - | Detail |
| C1H12g30331 | 12:2,103,104-2,106,502 | + | C2H12g10193 | CX12g015693 | LOC_Os12g05080 | Os12g0145400 | - | Detail |
| C1H12g05368 | 12:2,108,237-2,111,300 | + | C2H12g10516 | CX12g018278 | LOC_Os12g05090 | Os12g0145500 | - | Detail |
| C1H12g27500 | 12:2,112,187-2,114,890 | + | C2H12g04534 | CX12g018616 | LOC_Os11g05100 | Os11g0148400 | - | Detail |
| C1H12g17220 | 12:2,115,396-2,119,755 | - | C2H12g14726 | CX12g018156 | LOC_Os12g05110 | Os12g0145700 | OsPK4 | Detail |
| C1H12g13628 | 12:2,121,163-2,124,075 | - | C2H12g30566 | CX12g015785 | LOC_Os12g05120 | Os12g0145900 | - | Detail |
| C1H12g01108 | 12:2,135,485-2,136,298 | - | C2H12g15061 | CX12g018716 | LOC_Os12g05170 | Os12g0146400 | - | Detail |
| C1H12g25187 | 12:2,138,107-2,139,844 | - | C2H12g20480 | CX12g018292 | LOC_Os12g05180 | Os12g0146500 | - | Detail |
| C1H12g12080 | 12:2,156,235-2,159,471 | + | C2H12g30172 | CX12g016051 | LOC_Os12g05200 | Os12g0147000 | OsAHL20 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g020945 | 2:15,913,531-15,913,734 | - | - | - | LOC_Os05g42448 | - | - | Detail |
| CX2g023138 | 2:15,915,946-15,916,557 | - | - | - | - | - | - | Detail |
| CX2g019048 | 2:15,931,900-15,936,105 | + | C1H2g05787 | C2H2g29133 | LOC_Os02g27740 | Os02g0478500 | - | Detail |
| CX2g019540 | 2:15,948,113-15,948,364 | + | - | - | - | - | - | Detail |
| CX2g021026 | 2:15,949,933-15,950,644 | + | C1H2g31453 | C2H2g00622 | LOC_Os02g27760 | Os02g0478600 | - | Detail |
| CX2g021434 | 2:15,953,212-15,954,621 | + | C1H2g23077 | C2H2g29643 | LOC_Os02g27769 | Os02g0478700 | - | Detail |
| CX2g022501 | 2:15,958,336-15,959,358 | + | - | - | LOC_Os02g27790 | Os02g0478900 | - | Detail |
| CX2g020129 | 2:15,959,518-15,962,043 | + | C1H2g05324 | C2H2g15830 | LOC_Os02g27790 | Os02g0478900 | - | Detail |
| CX2g020752 | 2:15,964,286-15,964,918 | - | - | - | LOC_Os02g27800 | - | - | Detail |
| CX2g021429 | 2:15,971,882-15,972,043 | - | - | - | - | Os01g0612350 | - | Detail |
| CX2g023314 | 2:15,977,634-15,979,930 | - | C1H2g27566 | C2H2g08132 | LOC_Os02g27810 | Os02g0479300 | - | Detail |
| CX2g023237 | 2:15,998,980-16,003,061 | + | C1H2g02192 | C2H2g14883 | LOC_Os02g27940 | Os02g0480800 | - | Detail |
| CX2g018838 | 2:16,005,607-16,012,117 | - | C1H2g03099 | C2H2g01090 | LOC_Os02g27950 | Os02g0480900 | - | Detail |
| CX2g024690 | 2:16,018,486-16,020,641 | - | C1H2g20113 | C2H2g16284 | LOC_Os02g27960 | Os02g0481000 | - | Detail |
| CX2g022309 | 2:16,060,454-16,060,729 | + | - | - | LOC_Os04g22250 | Os03g0388300 | - | Detail |
| CX2g022240 | 2:16,098,651-16,099,115 | - | - | - | - | Os09g0373750 | - | Detail |
| CX2g024232 | 2:16,103,232-16,112,746 | - | C1H2g19483 | C2H2g02051 | LOC_Os02g28040 | Os02g0481700 | - | Detail |
| CX2g023813 | 2:16,115,979-16,125,209 | + | C1H2g16509 | C2H2g01590 | LOC_Os02g28074 | Os02g0481900 | OsXrn4-L | Detail |
| CX2g023954 | 2:16,142,170-16,145,478 | - | C1H2g08443 | C2H2g10741 | - | Os02g0777400 | OsER2 | Detail |
| CX2g019027 | 2:16,150,042-16,150,743 | - | - | - | - | - | - | Detail |