| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21434 | 3:10,641,439-10,643,405 | - | C1H3g21528 | CX3g025537 | LOC_Os03g21040 | Os03g0327600 | OsEULD1b | Detail |
| C2H3g30453 | 3:10,654,783-10,655,310 | - | C1H3g10132 | CX3g025194 | LOC_Os03g17850 | Os03g0793100 | - | Detail |
| C2H3g22568 | 3:10,659,900-10,661,693 | - | C1H3g19758 | CX3g030838 | LOC_Os03g21060 | Os03g0327800 | NAC58, OsNAP, ONAC058, ONAC58, PS1 | Detail |
| C2H3g01320 | 3:10,678,060-10,692,223 | + | C1H3g10903 | CX3g029575 | LOC_Os03g21080 | Os03g0328000 | OsSPK1 | Detail |
| C2H3g29789 | 3:10,692,664-10,696,424 | - | C1H3g31035 | CX3g027049 | LOC_Os03g21090 | Os03g0328100 | - | Detail |
| C2H3g13174 | 3:10,700,149-10,701,606 | + | C1H3g04874 | CX3g029317 | LOC_Os03g21110 | Os03g0328300 | - | Detail |
| C2H3g07542 | 3:10,702,222-10,707,739 | - | C1H3g01487 | CX3g030285 | LOC_Os03g21120 | Os03g0328400 | OsAPY1 | Detail |
| C2H3g24667 | 3:10,727,333-10,731,715 | + | C1H3g07714 | CX3g028818 | LOC_Os03g21140 | Os03g0328900 | - | Detail |
| C2H3g06727 | 3:10,752,571-10,756,320 | + | C1H3g05140 | CX3g027853 | LOC_Os03g21160 | Os03g0329200 | - | Detail |
| C2H3g01256 | 3:10,771,081-10,774,744 | - | C1H3g26417 | CX3g029596 | LOC_Os03g21210 | Os03g0329500 | OsGH9A1, OsGLU1 | Detail |
| C2H3g20489 | 3:10,786,945-10,792,264 | + | C1H3g12540 | CX3g030183 | LOC_Os03g21230 | Os03g0329700 | - | Detail |
| C2H3g04364 | 3:10,795,722-10,800,922 | + | C1H3g04812 | CX3g028538 | LOC_Os03g21240 | Os03g0329900 | PHR1, OsPHR1 | Detail |
| C2H3g14604 | 3:10,803,141-10,808,363 | - | C1H3g28228 | CX3g025595 | LOC_Os03g21250 | Os03g0330000 | - | Detail |
| C2H3g27204 | 3:10,818,910-10,823,205 | + | C1H3g13172 | CX3g026436 | LOC_Os03g21260 | Os03g0330200 | - | Detail |
| C2H3g15921 | 3:10,823,679-10,830,154 | - | C1H3g07101 | CX3g027510 | LOC_Os03g21270 | Os03g0330300 | - | Detail |
| C2H3g16525 | 3:10,856,932-10,860,314 | + | C1H3g17399 | CX3g030370 | LOC_Os03g21370 | Os03g0331600 | CS3, OsLCAA | Detail |
| C2H3g29448 | 3:10,862,540-10,863,112 | - | C1H3g03324 | CX3g028976 | LOC_Os03g21380 | Os03g0331700 | - | Detail |
| C2H3g00436 | 3:10,868,264-10,869,892 | + | C1H3g28515 | CX3g026949 | LOC_Os03g21390 | Os03g0331900 | - | Detail |
| C2H3g08774 | 3:10,872,406-10,875,995 | - | C1H3g12262 | CX3g025397 | LOC_Os03g21400 | Os03g0332100 | CYP714B2 | Detail |
| C2H3g14433 | 3:10,879,666-10,880,491 | - | C1H3g15931 | CX3g025397 | LOC_Os03g21419 | Os03g0332100 | CYP714B2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023839 | 2:15,378,453-15,378,602 | - | - | - | - | - | - | Detail |
| CX2g019974 | 2:15,393,471-15,393,758 | + | - | - | LOC_Os05g46070 | - | - | Detail |
| CX2g022863 | 2:15,394,370-15,405,254 | + | C1H2g03922 | C2H2g03662 | LOC_Os02g27000 | Os02g0469300 | - | Detail |
| CX2g023923 | 2:15,406,378-15,406,649 | - | - | - | - | - | - | Detail |
| CX2g024152 | 2:15,410,941-15,411,177 | + | - | - | - | - | - | Detail |
| CX2g023650 | 2:15,411,754-15,411,939 | - | - | - | - | - | - | Detail |
| CX2g021164 | 2:15,430,005-15,433,295 | + | C1H2g14140 | C2H2g19137 | LOC_Os02g27030 | Os02g0469600 | OsACP1 | Detail |
| CX2g022256 | 2:15,447,519-15,451,627 | + | C1H2g09800 | C2H2g06526 | LOC_Os02g27060 | Os02g0469900 | - | Detail |
| CX2g019236 | 2:15,454,274-15,456,233 | - | C1H2g11866 | C2H2g29701 | LOC_Os02g27070 | Os02g0470000 | - | Detail |
| CX2g019176 | 2:15,460,172-15,460,552 | - | - | - | - | - | - | Detail |
| CX2g020404 | 2:15,480,299-15,526,253 | - | C1H2g17839 | C2H2g23766 | LOC_Os02g27110 | Os02g0470400 | - | Detail |
| CX2g022547 | 2:15,528,735-15,529,253 | - | - | - | LOC_Os02g27140 | - | - | Detail |
| CX2g019408 | 2:15,539,610-15,540,035 | - | C1H2g17708 | - | - | Os02g0471100 | - | Detail |
| CX2g020865 | 2:15,541,288-15,544,065 | + | C1H2g07522 | C2H2g07152 | LOC_Os02g27200 | Os02g0471300 | - | Detail |
| CX2g021066 | 2:15,547,347-15,551,771 | - | C1H2g05586 | C2H2g29356 | LOC_Os02g27220 | Os02g0471500 | - | Detail |
| CX2g020671 | 2:15,591,844-15,592,032 | - | - | - | - | Os07g0137500 | - | Detail |
| CX2g020901 | 2:15,610,903-15,611,802 | + | C1H2g13395 | C2H2g07089 | LOC_Os02g27300 | Os02g0472500 | - | Detail |
| CX2g024444 | 2:15,611,885-15,612,208 | - | C1H7g25375 | C2H12g28545 | LOC_Os07g35200 | - | - | Detail |
| CX2g019519 | 2:15,620,209-15,623,097 | + | C1H2g20001 | C2H2g11544 | LOC_Os02g27310 | Os02g0472700 | MAK3 | Detail |
| CX2g020971 | 2:15,636,397-15,642,905 | - | C1H2g15677 | C2H2g00979 | - | Os02g0473000 | - | Detail |