| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g24206 | 3:8,667,771-8,672,718 | + | C1H3g05382 | CX3g025186 | LOC_Os03g17730 | Os03g0286200 | - | Detail |
| C2H3g05135 | 3:8,677,799-8,682,189 | + | C1H3g30819 | CX3g029393 | LOC_Os03g17740 | Os03g0286300 | - | Detail |
| C2H3g11924 | 3:8,683,738-8,686,415 | - | C1H3g23357 | CX3g028814 | LOC_Os03g17760 | Os03g0286500 | - | Detail |
| C2H3g28874 | 3:8,695,021-8,697,752 | + | C1H3g16747 | CX3g028365 | LOC_Os03g17780 | Os03g0286800 | - | Detail |
| C2H3g08715 | 3:8,699,607-8,699,900 | - | C1H3g27086 | CX3g026690 | LOC_Os03g17790 | Os03g0286900 | OsRCI2-5 | Detail |
| C2H3g22847 | 3:8,712,856-8,714,795 | - | C1H3g29184 | CX3g030677 | LOC_Os03g17800 | Os03g0287100 | OsPITPα, OsPITPalpha | Detail |
| C2H3g20359 | 3:8,722,326-8,723,144 | - | C1H3g05095 | CX3g026247 | LOC_Os03g17810 | Os03g0287400 | - | Detail |
| C2H3g27675 | 3:8,735,429-8,742,014 | + | C1H3g02097 | CX3g029968 | LOC_Os03g17840 | Os03g0287700 | - | Detail |
| C2H3g09757 | 3:8,747,148-8,751,931 | + | C1H3g16177 | CX3g025194 | LOC_Os03g17850 | Os03g0287800 | OsGT43B | Detail |
| C2H3g14774 | 3:8,753,869-8,755,869 | - | C1H3g12393 | CX3g027864 | LOC_Os03g17860 | Os03g0287900 | - | Detail |
| C2H3g27564 | 3:8,755,868-8,758,577 | + | C1H3g31312 | CX3g028664 | LOC_Os03g17870 | Os03g0288000 | - | Detail |
| C2H3g22831 | 3:8,759,496-8,765,252 | + | - | - | - | Os02g0151600 | - | Detail |
| C2H3g23362 | 3:8,774,283-8,779,488 | + | C1H3g00118 | CX3g028015 | LOC_Os03g17900 | Os03g0288300 | - | Detail |
| C2H3g17267 | 3:8,780,761-8,782,793 | + | C1H3g25481 | CX3g026722 | LOC_Os03g17910 | Os03g0288400 | - | Detail |
| C2H3g21876 | 3:8,783,154-8,787,793 | + | C1H3g14781 | CX3g027011 | LOC_Os03g17920 | Os03g0288500 | - | Detail |
| C2H3g27997 | 3:8,789,437-8,792,622 | + | C1H3g27293 | CX3g030831 | LOC_Os03g17930 | Os03g0288600 | - | Detail |
| C2H3g11409 | 3:8,793,554-8,795,466 | - | C1H3g19930 | CX3g027560 | LOC_Os03g17940 | Os03g0288700 | - | Detail |
| C2H3g03519 | 3:8,799,470-8,803,591 | + | C1H3g10814 | CX3g029037 | LOC_Os03g17950 | Os03g0288800 | - | Detail |
| C2H3g04708 | 3:8,803,959-8,806,458 | + | C1H3g03942 | CX3g026332 | LOC_Os03g17960 | Os03g0288900 | - | Detail |
| C2H3g30489 | 3:8,811,026-8,816,343 | + | C1H3g28173 | CX3g025870 | LOC_Os03g17980 | Os03g0289100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g024852 | 2:15,166,338-15,172,135 | - | C1H2g24229 | C2H2g20421 | LOC_Os02g26650 | Os02g0465400 | OsDHCR7 | Detail |
| CX2g024679 | 2:15,175,112-15,175,312 | - | - | - | - | Os02g0630650 | - | Detail |
| CX2g020753 | 2:15,189,416-15,189,613 | - | - | - | LOC_Os02g29750 | - | - | Detail |
| CX2g022338 | 2:15,194,578-15,199,210 | - | C1H2g25809 | C2H2g06691 | LOC_Os02g26660 | Os02g0465500 | - | Detail |
| CX2g024411 | 2:15,202,683-15,203,885 | - | - | - | LOC_Os02g26670 | Os02g0465600 | - | Detail |
| CX2g019150 | 2:15,211,514-15,215,053 | - | C1H2g20670 | C2H2g12733 | LOC_Os02g26700 | Os02g0465900 | OsARP, OsCTP | Detail |
| CX2g020156 | 2:15,242,608-15,243,582 | + | - | - | LOC_Os02g26720 | Os02g0466400 | - | Detail |
| CX2g022703 | 2:15,251,997-15,253,802 | - | C1H2g16591 | C2H2g15284 | LOC_Os02g26770 | Os02g0467600 | - | Detail |
| CX2g020093 | 2:15,263,300-15,265,096 | + | C1H2g27142 | C2H2g11442 | LOC_Os02g26810 | Os02g0467600 | - | Detail |
| CX2g019894 | 2:15,269,250-15,271,136 | + | C1H2g15767 | C2H2g03170 | LOC_Os02g26814 | Os02g0467700 | - | Detail |
| CX2g023724 | 2:15,280,607-15,281,629 | + | - | - | LOC_Os02g26840 | Os02g0468100 | - | Detail |
| CX2g023894 | 2:15,283,697-15,287,122 | - | C1H2g10068 | C2H2g24861 | LOC_Os02g26850 | Os02g0468200 | - | Detail |
| CX2g021964 | 2:15,291,901-15,296,166 | + | C1H2g09034 | C2H2g01661 | LOC_Os02g26860 | Os02g0468400 | - | Detail |
| CX2g022272 | 2:15,324,896-15,326,416 | + | C1H2g11866 | C2H2g25346 | LOC_Os02g26890 | Os02g0468500 | - | Detail |
| CX2g022024 | 2:15,332,437-15,332,982 | + | - | - | - | - | - | Detail |
| CX2g023195 | 2:15,342,541-15,342,867 | - | - | C2H2g05102 | - | - | - | Detail |
| CX2g020394 | 2:15,349,350-15,351,161 | - | C1H2g17305 | C2H2g06654 | LOC_Os02g26940 | Os02g0468800 | - | Detail |
| CX2g024051 | 2:15,357,482-15,358,237 | + | C1H2g28525 | C2H2g09996 | LOC_Os02g26960 | Os02g0469000 | - | Detail |
| CX2g021400 | 2:15,361,432-15,371,228 | + | C1H2g22501 | C2H2g27914 | LOC_Os02g26984 | Os02g0469200 | - | Detail |
| CX2g021712 | 2:15,372,147-15,383,406 | + | C1H2g22501 | C2H2g27914 | LOC_Os02g26984 | - | - | Detail |