| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g19937 | 4:5,291,901-5,292,961 | + | C2H4g08911 | CX4g035259 | LOC_Os04g11970 | Os04g0196200 | OsASMT2 | Detail |
| C1H4g07183 | 4:5,314,463-5,317,161 | - | C2H4g17260 | CX4g034245 | LOC_Os04g12010 | Os04g0196600 | - | Detail |
| C1H4g18138 | 4:5,360,316-5,361,260 | + | C2H4g18642 | - | LOC_Os04g12060 | Os04g0197100 | - | Detail |
| C1H4g08988 | 4:5,365,722-5,370,854 | + | C2H4g00649 | CX4g035840 | LOC_Os04g12080 | Os04g0197200 | - | Detail |
| C1H4g25771 | 4:5,383,678-5,385,078 | - | C2H4g18722 | CX4g031765 | - | Os04g0197500 | - | Detail |
| C1H4g21757 | 4:5,393,908-5,398,869 | - | C2H4g14359 | CX1g000225 | - | Os04g0226400 | - | Detail |
| C1H4g22550 | 4:5,400,219-5,400,623 | + | - | - | - | - | - | Detail |
| C1H4g27102 | 4:5,441,945-5,450,377 | + | C2H4g15606 | CX4g035107 | LOC_Os04g12140 | Os04g0198733 | - | Detail |
| C1H4g06363 | 4:5,465,567-5,467,925 | - | - | - | - | - | - | Detail |
| C1H4g17776 | 4:5,469,221-5,470,399 | + | C2H4g26263 | CX4g032660 | - | Os04g0195100 | - | Detail |
| C1H4g14073 | 4:5,504,041-5,505,003 | + | C2H4g26263 | CX4g032660 | - | Os04g0195100 | - | Detail |
| C1H4g12642 | 4:5,563,624-5,567,254 | + | C2H4g11156 | CX4g034543 | - | Os09g0124200 | - | Detail |
| C1H4g15169 | 4:5,636,019-5,638,800 | - | C2H4g14785 | CX4g034359 | LOC_Os04g12390 | Os04g0200400 | - | Detail |
| C1H4g14978 | 4:5,644,403-5,645,228 | - | C2H4g14785 | CX4g034359 | LOC_Os04g12390 | Os04g0200400 | - | Detail |
| C1H4g16267 | 4:5,768,059-5,771,751 | - | C2H4g18135 | CX4g031446 | LOC_Os04g12460 | Os04g0201000 | - | Detail |
| C1H4g16105 | 4:5,789,191-5,795,814 | - | C2H4g10504 | CX4g034375 | LOC_Os04g12480 | Os04g0201200 | - | Detail |
| C1H4g17374 | 4:5,823,492-5,834,769 | - | C2H4g26946 | CX4g033852 | LOC_Os04g12530 | Os04g0201500 | OsAAT30 | Detail |
| C1H4g14971 | 4:5,847,100-5,850,704 | - | C2H4g03852 | CX4g034779 | LOC_Os04g12540 | Os04g0201900 | SDRLK-LecRK1, OsLecRK1, Bph3 | Detail |
| C1H4g07233 | 4:5,851,032-5,851,822 | + | - | - | - | - | - | Detail |
| C1H4g17048 | 4:5,863,850-5,866,285 | - | C2H4g12193 | CX4g034921 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023631 | 2:11,770,379-11,777,237 | + | C1H2g25889 | C2H2g24833 | LOC_Os02g21520 | Os02g0320300 | - | Detail |
| CX2g020030 | 2:11,783,713-11,784,714 | + | C1H2g30985 | C2H2g25887 | LOC_Os02g21530 | Os02g0320600 | - | Detail |
| CX2g019183 | 2:11,785,976-11,789,186 | + | C1H1g26333 | C2H2g17365 | - | - | - | Detail |
| CX2g019550 | 2:11,809,746-11,809,961 | - | - | - | - | - | - | Detail |
| CX2g019143 | 2:11,812,310-11,815,142 | + | C1H2g12133 | C2H2g27274 | LOC_Os02g21550 | Os02g0320800 | OsHSL3 | Detail |
| CX2g020478 | 2:11,844,150-11,844,314 | - | - | - | - | - | - | Detail |
| CX2g019412 | 2:11,847,061-11,851,857 | - | C1H2g16115 | C2H2g11366 | LOC_Os02g21580 | Os02g0321000 | OsTMS19 | Detail |
| CX2g023791 | 2:11,852,929-11,857,115 | + | C1H2g23464 | C2H2g24361 | LOC_Os02g21630 | Os02g0321500 | OsPITP6 | Detail |
| CX2g021615 | 2:11,858,373-11,858,939 | + | C1H2g11952 | C2H2g15777 | LOC_Os02g21640 | Os02g0321600 | - | Detail |
| CX2g020549 | 2:11,862,368-11,866,630 | + | C1H2g16262 | C2H2g29342 | LOC_Os02g21650 | Os02g0321800 | - | Detail |
| CX2g020368 | 2:11,869,405-11,872,044 | + | C1H2g22684 | C2H2g06618 | LOC_Os02g21660 | Os02g0321900 | - | Detail |
| CX2g024830 | 2:11,880,529-11,880,729 | - | - | - | - | - | - | Detail |
| CX2g019599 | 2:11,887,682-11,887,891 | - | - | C2H2g07243 | LOC_Os02g21685 | Os02g0681900 | - | Detail |
| CX2g019298 | 2:11,892,860-11,901,886 | + | C1H2g30813 | C2H2g01490 | LOC_Os02g21700 | Os02g0322400 | - | Detail |
| CX2g024245 | 2:11,905,693-11,913,634 | - | C1H2g19781 | C2H2g00504 | LOC_Os02g21750 | Os02g0323000 | - | Detail |
| CX2g019427 | 2:11,929,165-11,929,392 | - | - | - | - | - | - | Detail |
| CX2g023301 | 2:11,957,853-11,959,460 | + | C1H2g01825 | C2H2g08964 | LOC_Os02g21810 | Os02g0323600 | - | Detail |
| CX2g020914 | 2:11,969,444-11,969,680 | - | - | - | - | - | - | Detail |
| CX2g024252 | 2:11,977,895-11,978,077 | - | - | - | - | - | - | Detail |
| CX2g024443 | 2:11,998,283-12,003,178 | + | C1H2g29625 | C2H2g27252 | LOC_Os02g21880 | Os02g0324300 | - | Detail |