| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g20866 | 4:26,990,086-26,990,352 | + | C1H4g28262 | CX4g034575 | LOC_Os04g52750 | Os04g0618400 | - | Detail |
| C2H4g09538 | 4:26,991,360-26,995,438 | - | C1H4g01403 | CX4g035558 | LOC_Os04g52760 | Os04g0618500 | - | Detail |
| C2H4g06850 | 4:26,997,594-26,998,676 | + | C1H4g16234 | CX4g034460 | LOC_Os04g52770 | Os04g0618600 | PIF1 | Detail |
| C2H4g10397 | 4:26,999,867-27,004,023 | - | C1H4g28199 | CX4g034704 | LOC_Os04g52780 | Os04g0618700 | OsFLS2 | Detail |
| C2H4g19624 | 4:27,013,456-27,014,478 | - | - | - | LOC_Os04g52800 | Os04g0618950 | - | Detail |
| C2H4g00816 | 4:27,019,472-27,022,555 | - | C1H4g22303 | CX4g036144 | LOC_Os04g52810 | Os04g0619000 | ONAC083 | Detail |
| C2H4g22466 | 4:27,026,632-27,028,484 | + | - | CX4g034825 | - | - | - | Detail |
| C2H4g08987 | 4:27,028,967-27,029,331 | + | C1H4g06933 | CX4g032452 | - | - | - | Detail |
| C2H4g28780 | 4:27,037,962-27,041,128 | + | C1H4g18636 | CX4g031427 | LOC_Os04g52830 | Os04g0619300 | Ctb1 | Detail |
| C2H4g02197 | 4:27,042,195-27,045,554 | - | C1H4g13931 | CX4g035196 | LOC_Os04g52840 | Os04g0619400 | OsRLCK160 | Detail |
| C2H4g23444 | 4:27,051,632-27,054,535 | + | C1H4g15202 | CX4g033062 | LOC_Os04g52850 | Os04g0619500 | - | Detail |
| C2H4g18841 | 4:27,056,658-27,059,192 | - | C1H4g24641 | CX4g033748 | LOC_Os04g52860 | Os04g0619600 | - | Detail |
| C2H4g25907 | 4:27,063,020-27,066,257 | - | C1H4g04907 | - | - | - | - | Detail |
| C2H4g02631 | 4:27,069,306-27,070,566 | + | - | - | LOC_Os04g52880 | Os04g0619800 | - | Detail |
| C2H4g06612 | 4:27,079,390-27,084,156 | + | C1H4g18235 | CX4g036286 | LOC_Os04g52890 | Os04g0619900 | - | Detail |
| C2H4g03746 | 4:27,084,868-27,097,303 | - | C1H4g18046 | CX4g032062 | LOC_Os04g52900 | Os04g0620000 | MRP1, OsABCC1, OsABCC1-1, OsABCC1-2, OsMRP1 | Detail |
| C2H4g26107 | 4:27,101,123-27,101,539 | - | - | - | LOC_Os04g52910 | - | - | Detail |
| C2H4g21419 | 4:27,104,775-27,105,700 | + | - | - | - | - | - | Detail |
| C2H4g02835 | 4:27,106,476-27,108,281 | + | C1H4g11396 | CX4g031475 | LOC_Os04g52920 | Os04g0620200 | GSD1, OsREM6.6, REM6.6 | Detail |
| C2H4g19928 | 4:27,114,110-27,124,400 | + | C1H4g24139 | CX4g032286 | LOC_Os04g52940 | Os04g0620500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004741 | 1:9,850,274-9,851,971 | + | C1H1g28168 | C2H1g18802 | LOC_Os01g19440 | Os01g0254300 | - | Detail |
| CX1g001479 | 1:9,852,484-9,856,439 | - | C1H1g17298 | C2H1g05510 | LOC_Os01g19450 | Os01g0300200 | - | Detail |
| CX1g006770 | 1:9,868,125-9,868,473 | - | - | - | - | - | - | Detail |
| CX1g000059 | 1:9,871,223-9,884,189 | - | C1H1g08590 | C2H1g09549 | LOC_Os01g19470 | Os01g0300600 | - | Detail |
| CX1g005474 | 1:9,904,289-9,909,169 | + | C1H1g05959 | C2H1g24739 | LOC_Os01g19480 | Os01g0300900 | - | Detail |
| CX1g000842 | 1:9,910,812-9,914,080 | - | C1H1g20660 | C2H1g16884 | LOC_Os01g19490 | Os01g0301000 | - | Detail |
| CX1g001057 | 1:9,922,518-9,926,676 | - | C1H1g04053 | C2H1g04937 | LOC_Os01g19548 | Os01g0301700 | - | Detail |
| CX1g000700 | 1:9,932,410-9,935,745 | - | C1H1g28444 | C2H1g30243 | LOC_Os01g19610 | Os01g0301900 | - | Detail |
| CX1g005625 | 1:9,941,342-9,941,605 | + | C1H1g07961 | C2H1g25243 | - | Os01g0302000 | - | Detail |
| CX1g000668 | 1:9,950,311-9,950,478 | - | - | - | - | - | - | Detail |
| CX1g001886 | 1:9,966,558-9,967,412 | + | C1H1g08220 | C2H1g20277 | LOC_Os01g19694 | Os01g0302500 | OSH6 | Detail |
| CX1g003033 | 1:9,972,664-9,975,992 | + | C1H1g25873 | C2H1g00180 | LOC_Os01g19694 | Os01g0302500 | OSH6 | Detail |
| CX1g006561 | 1:9,992,649-9,992,852 | - | - | - | LOC_Os01g19740 | Os01g0303000 | - | Detail |
| CX1g005665 | 1:9,996,081-9,997,010 | + | - | - | - | - | - | Detail |
| CX1g002241 | 1:9,999,407-10,008,646 | + | C1H1g30343 | C2H1g22139 | LOC_Os01g19760 | Os01g0303200 | - | Detail |
| CX1g005267 | 1:10,010,046-10,011,315 | - | C1H1g08611 | C2H1g28692 | LOC_Os01g19770 | Os01g0303300 | - | Detail |
| CX1g003424 | 1:10,019,328-10,020,086 | + | C1H1g06976 | C2H1g03869 | - | - | - | Detail |
| CX1g005002 | 1:10,027,527-10,030,375 | - | C1H1g10454 | C2H1g08897 | LOC_Os01g19800 | Os01g0303600 | - | Detail |
| CX1g007072 | 1:10,041,111-10,042,106 | + | C1H1g12064 | C2H1g15081 | LOC_Os01g19820 | Os01g0303800 | - | Detail |
| CX1g004233 | 1:10,043,529-10,044,626 | - | C1H1g07873 | C2H1g09569 | LOC_Os01g19840 | Os01g0304000 | - | Detail |