| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g30640 | 4:1,719,255-1,723,962 | + | C1H4g17799 | CX4g036248 | LOC_Os04g04330 | Os04g0132500 | CTB4a, OsRLCK127, RLCK127 | Detail |
| C2H4g19144 | 4:1,739,532-1,740,113 | - | C1H4g19447 | CX4g034832 | - | - | - | Detail |
| C2H4g05610 | 4:1,764,995-1,767,457 | + | C1H4g23533 | CX4g032097 | LOC_Os04g04750 | Os04g0134800 | - | Detail |
| C2H4g00703 | 4:1,777,022-1,779,592 | - | C1H4g07028 | CX4g035198 | LOC_Os04g04670 | Os04g0125700 | - | Detail |
| C2H4g09916 | 4:1,791,202-1,791,932 | - | C1H4g07028 | CX4g032348 | LOC_Os04g04770 | Os04g0125700 | - | Detail |
| C2H4g15842 | 4:1,841,229-1,843,356 | + | C1H4g07028 | CX4g032198 | LOC_Os04g04670 | Os04g0125700 | - | Detail |
| C2H4g06784 | 4:1,926,268-1,927,874 | + | C1H4g07028 | CX4g034389 | LOC_Os04g04670 | Os04g0136000 | - | Detail |
| C2H4g27188 | 4:1,989,202-1,989,675 | - | - | CX4g032153 | - | - | - | Detail |
| C2H4g18525 | 4:2,014,982-2,015,732 | - | - | CX4g034918 | - | - | - | Detail |
| C2H4g26240 | 4:2,023,261-2,024,654 | - | C1H4g07028 | CX4g032163 | LOC_Os04g05470 | Os04g0125700 | - | Detail |
| C2H4g08696 | 4:2,025,532-2,026,003 | - | C1H4g07028 | CX4g032163 | LOC_Os04g05470 | Os04g0140666 | - | Detail |
| C2H4g14822 | 4:2,053,699-2,054,665 | - | C1H4g07028 | CX4g032348 | LOC_Os04g04770 | Os04g0125700 | - | Detail |
| C2H4g13248 | 4:2,075,582-2,078,396 | - | C1H4g07691 | CX4g036479 | LOC_Os04g05010 | Os04g0136700 | - | Detail |
| C2H4g08946 | 4:2,087,740-2,089,679 | + | C1H4g00435 | CX4g033792 | LOC_Os04g05030 | Os04g0136900 | - | Detail |
| C2H4g24029 | 4:2,119,317-2,124,783 | + | C1H4g17319 | CX4g036173 | LOC_Os04g05050 | Os04g0137201 | OsPLL4.2 | Detail |
| C2H4g03790 | 4:2,139,695-2,140,441 | - | C1H4g22056 | CX4g032910 | LOC_Os04g05070 | Os04g0137450 | - | Detail |
| C2H4g29226 | 4:2,148,952-2,152,002 | + | C1H4g09732 | CX4g033283 | LOC_Os04g05080 | Os04g0137500 | - | Detail |
| C2H4g11106 | 4:2,167,536-2,167,985 | - | - | - | - | - | - | Detail |
| C2H4g03441 | 4:2,178,143-2,186,459 | - | C1H4g13170 | CX4g035554 | LOC_Os04g05470 | Os04g0140400 | - | Detail |
| C2H4g16775 | 4:2,186,503-2,187,141 | - | C1H4g07028 | CX4g035554 | LOC_Os04g05470 | Os04g0140666 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004741 | 1:9,850,274-9,851,971 | + | C1H1g28168 | C2H1g18802 | LOC_Os01g19440 | Os01g0254300 | - | Detail |
| CX1g001479 | 1:9,852,484-9,856,439 | - | C1H1g17298 | C2H1g05510 | LOC_Os01g19450 | Os01g0300200 | - | Detail |
| CX1g006770 | 1:9,868,125-9,868,473 | - | - | - | - | - | - | Detail |
| CX1g000059 | 1:9,871,223-9,884,189 | - | C1H1g08590 | C2H1g09549 | LOC_Os01g19470 | Os01g0300600 | - | Detail |
| CX1g005474 | 1:9,904,289-9,909,169 | + | C1H1g05959 | C2H1g24739 | LOC_Os01g19480 | Os01g0300900 | - | Detail |
| CX1g000842 | 1:9,910,812-9,914,080 | - | C1H1g20660 | C2H1g16884 | LOC_Os01g19490 | Os01g0301000 | - | Detail |
| CX1g001057 | 1:9,922,518-9,926,676 | - | C1H1g04053 | C2H1g04937 | LOC_Os01g19548 | Os01g0301700 | - | Detail |
| CX1g000700 | 1:9,932,410-9,935,745 | - | C1H1g28444 | C2H1g30243 | LOC_Os01g19610 | Os01g0301900 | - | Detail |
| CX1g005625 | 1:9,941,342-9,941,605 | + | C1H1g07961 | C2H1g25243 | - | Os01g0302000 | - | Detail |
| CX1g000668 | 1:9,950,311-9,950,478 | - | - | - | - | - | - | Detail |
| CX1g001886 | 1:9,966,558-9,967,412 | + | C1H1g08220 | C2H1g20277 | LOC_Os01g19694 | Os01g0302500 | OSH6 | Detail |
| CX1g003033 | 1:9,972,664-9,975,992 | + | C1H1g25873 | C2H1g00180 | LOC_Os01g19694 | Os01g0302500 | OSH6 | Detail |
| CX1g006561 | 1:9,992,649-9,992,852 | - | - | - | LOC_Os01g19740 | Os01g0303000 | - | Detail |
| CX1g005665 | 1:9,996,081-9,997,010 | + | - | - | - | - | - | Detail |
| CX1g002241 | 1:9,999,407-10,008,646 | + | C1H1g30343 | C2H1g22139 | LOC_Os01g19760 | Os01g0303200 | - | Detail |
| CX1g005267 | 1:10,010,046-10,011,315 | - | C1H1g08611 | C2H1g28692 | LOC_Os01g19770 | Os01g0303300 | - | Detail |
| CX1g003424 | 1:10,019,328-10,020,086 | + | C1H1g06976 | C2H1g03869 | - | - | - | Detail |
| CX1g005002 | 1:10,027,527-10,030,375 | - | C1H1g10454 | C2H1g08897 | LOC_Os01g19800 | Os01g0303600 | - | Detail |
| CX1g007072 | 1:10,041,111-10,042,106 | + | C1H1g12064 | C2H1g15081 | LOC_Os01g19820 | Os01g0303800 | - | Detail |
| CX1g004233 | 1:10,043,529-10,044,626 | - | C1H1g07873 | C2H1g09569 | LOC_Os01g19840 | Os01g0304000 | - | Detail |