| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g08146 | 3:25,060,344-25,073,286 | + | C1H3g30763 | CX3g027759 | - | - | - | Detail |
| C2H3g06193 | 3:25,080,310-25,093,249 | - | C1H3g31689 | CX3g025545 | LOC_Os03g48140 | Os03g0686300 | - | Detail |
| C2H3g15650 | 3:25,099,612-25,102,820 | + | C1H3g17077 | CX3g025241 | LOC_Os03g48160 | Os03g0253100 | - | Detail |
| C2H3g12008 | 3:25,104,383-25,108,435 | + | C1H3g31064 | CX3g025276 | LOC_Os03g48170 | Os03g0686900 | FLO6 | Detail |
| C2H3g19404 | 3:25,109,095-25,114,669 | - | C1H3g04074 | CX3g025668 | LOC_Os03g51050 | Os03g0687000 | OsNPF2.4, NPF2.4, OsPTR2, PTR2 | Detail |
| C2H3g17935 | 3:25,127,611-25,131,595 | - | C1H3g27780 | CX3g029198 | LOC_Os03g48190 | Os03g0687200 | - | Detail |
| C2H3g12687 | 3:25,135,284-25,136,030 | - | C1H3g26805 | CX3g025750 | LOC_Os03g48200 | Os03g0687400 | - | Detail |
| C2H3g13078 | 3:25,137,917-25,138,663 | - | C1H3g31647 | CX3g029222 | LOC_Os03g48220 | Os03g0687700 | - | Detail |
| C2H3g02466 | 3:25,140,936-25,141,493 | - | C1H3g02479 | CX3g025750 | LOC_Os03g48225 | Os03g0687800 | - | Detail |
| C2H3g05793 | 3:25,142,535-25,143,269 | - | C1H3g12014 | CX3g028579 | LOC_Os03g48235 | Os03g0688000 | - | Detail |
| C2H3g06136 | 3:25,144,788-25,145,247 | - | C1H3g12256 | CX3g029222 | LOC_Os03g48220 | Os03g0687700 | - | Detail |
| C2H3g19874 | 3:25,146,922-25,151,844 | + | C1H3g24497 | CX3g029090 | LOC_Os03g48260 | Os03g0688200 | - | Detail |
| C2H3g05160 | 3:25,157,608-25,163,002 | + | C1H3g21570 | CX3g025253 | LOC_Os03g48270 | Os03g0688300 | CDPK9, OsCDPK9, OsCPK9 | Detail |
| C2H3g19979 | 3:25,186,796-25,214,847 | + | C1H3g15303 | CX3g027485 | LOC_Os03g48300 | Os03g0689100 | - | Detail |
| C2H3g24844 | 3:25,222,977-25,230,070 | + | C1H3g28879 | CX3g027452 | LOC_Os03g48310 | Os03g0689300 | - | Detail |
| C2H3g06110 | 3:25,231,632-25,235,399 | - | C1H3g09435 | CX3g026383 | LOC_Os03g48380 | Os03g0689900 | - | Detail |
| C2H3g14932 | 3:25,237,216-25,239,557 | + | C1H3g04287 | CX3g027552 | LOC_Os03g48390 | Os03g0690000 | - | Detail |
| C2H3g03020 | 3:25,282,883-25,286,063 | - | C1H3g28354 | CX3g028707 | LOC_Os03g48450 | Os03g0690600 | - | Detail |
| C2H3g18585 | 3:25,290,921-25,294,737 | + | C1H3g15398 | - | LOC_Os03g48471 | Os03g0690700 | - | Detail |
| C2H3g25812 | 3:25,324,182-25,326,537 | - | C1H3g11606 | CX3g027625 | LOC_Os03g48480 | Os03g0691400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g021171 | 2:11,591,557-11,592,005 | + | C1H2g31644 | C2H2g14602 | - | - | - | Detail |
| CX2g024653 | 2:11,595,869-11,599,221 | - | C1H2g00520 | C2H2g29719 | LOC_Os02g21240 | Os02g0317300 | - | Detail |
| CX2g023538 | 2:11,602,784-11,608,308 | + | C1H2g08373 | C2H2g17061 | LOC_Os02g21250 | Os02g0317400 | - | Detail |
| CX2g022792 | 2:11,609,457-11,613,923 | - | C1H2g09388 | C2H2g18266 | LOC_Os02g21260 | Os02g0317500 | - | Detail |
| CX2g023978 | 2:11,617,516-11,620,647 | - | C1H2g16859 | C2H2g12128 | LOC_Os02g21280 | Os02g0317800 | - | Detail |
| CX2g020774 | 2:11,622,221-11,622,382 | + | - | - | - | - | - | Detail |
| CX2g020967 | 2:11,626,434-11,626,595 | - | - | - | - | - | - | Detail |
| CX2g024666 | 2:11,633,172-11,635,408 | + | C1H2g08550 | C2H2g22334 | LOC_Os02g21300 | Os02g0318100 | - | Detail |
| CX2g021387 | 2:11,646,006-11,647,282 | - | C1H2g31644 | C2H2g14602 | LOC_Os02g21310 | Os02g0318200 | - | Detail |
| CX2g019705 | 2:11,654,705-11,657,277 | + | C1H2g10217 | C2H2g05102 | - | - | - | Detail |
| CX2g022169 | 2:11,656,575-11,657,270 | - | C1H2g31644 | C2H2g14602 | LOC_Os02g21220 | Os02g0318400 | - | Detail |
| CX2g024606 | 2:11,664,505-11,670,562 | - | C1H2g08002 | C2H2g03069 | LOC_Os02g21340 | Os02g0318500 | - | Detail |
| CX2g020551 | 2:11,667,389-11,667,565 | + | - | - | - | - | - | Detail |
| CX2g021672 | 2:11,690,175-11,690,612 | - | - | - | LOC_Os02g21390 | - | - | Detail |
| CX2g024414 | 2:11,707,045-11,713,900 | + | C1H2g09114 | C2H2g05008 | LOC_Os02g21430 | Os02g0319100 | - | Detail |
| CX2g022680 | 2:11,721,758-11,724,781 | - | C1H2g02929 | C2H2g29606 | LOC_Os02g21460 | Os02g0319300 | - | Detail |
| CX2g023656 | 2:11,728,618-11,733,256 | - | C1H2g00217 | C2H2g16870 | LOC_Os02g21490 | Os02g0319800 | - | Detail |
| CX2g024325 | 2:11,744,030-11,744,642 | + | C1H2g09105 | - | - | - | - | Detail |
| CX2g020525 | 2:11,749,032-11,752,428 | - | C1H2g00279 | C2H2g14591 | LOC_Os02g21510 | Os02g0320100 | ROX2 | Detail |
| CX2g020653 | 2:11,757,288-11,757,758 | + | - | - | - | - | - | Detail |