| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g20866 | 4:26,990,086-26,990,352 | + | C1H4g28262 | CX4g034575 | LOC_Os04g52750 | Os04g0618400 | - | Detail |
| C2H4g09538 | 4:26,991,360-26,995,438 | - | C1H4g01403 | CX4g035558 | LOC_Os04g52760 | Os04g0618500 | - | Detail |
| C2H4g06850 | 4:26,997,594-26,998,676 | + | C1H4g16234 | CX4g034460 | LOC_Os04g52770 | Os04g0618600 | PIF1 | Detail |
| C2H4g10397 | 4:26,999,867-27,004,023 | - | C1H4g28199 | CX4g034704 | LOC_Os04g52780 | Os04g0618700 | OsFLS2 | Detail |
| C2H4g19624 | 4:27,013,456-27,014,478 | - | - | - | LOC_Os04g52800 | Os04g0618950 | - | Detail |
| C2H4g00816 | 4:27,019,472-27,022,555 | - | C1H4g22303 | CX4g036144 | LOC_Os04g52810 | Os04g0619000 | ONAC083 | Detail |
| C2H4g22466 | 4:27,026,632-27,028,484 | + | - | CX4g034825 | - | - | - | Detail |
| C2H4g08987 | 4:27,028,967-27,029,331 | + | C1H4g06933 | CX4g032452 | - | - | - | Detail |
| C2H4g28780 | 4:27,037,962-27,041,128 | + | C1H4g18636 | CX4g031427 | LOC_Os04g52830 | Os04g0619300 | Ctb1 | Detail |
| C2H4g02197 | 4:27,042,195-27,045,554 | - | C1H4g13931 | CX4g035196 | LOC_Os04g52840 | Os04g0619400 | OsRLCK160 | Detail |
| C2H4g23444 | 4:27,051,632-27,054,535 | + | C1H4g15202 | CX4g033062 | LOC_Os04g52850 | Os04g0619500 | - | Detail |
| C2H4g18841 | 4:27,056,658-27,059,192 | - | C1H4g24641 | CX4g033748 | LOC_Os04g52860 | Os04g0619600 | - | Detail |
| C2H4g25907 | 4:27,063,020-27,066,257 | - | C1H4g04907 | - | - | - | - | Detail |
| C2H4g02631 | 4:27,069,306-27,070,566 | + | - | - | LOC_Os04g52880 | Os04g0619800 | - | Detail |
| C2H4g06612 | 4:27,079,390-27,084,156 | + | C1H4g18235 | CX4g036286 | LOC_Os04g52890 | Os04g0619900 | - | Detail |
| C2H4g03746 | 4:27,084,868-27,097,303 | - | C1H4g18046 | CX4g032062 | LOC_Os04g52900 | Os04g0620000 | MRP1, OsABCC1, OsABCC1-1, OsABCC1-2, OsMRP1 | Detail |
| C2H4g26107 | 4:27,101,123-27,101,539 | - | - | - | LOC_Os04g52910 | - | - | Detail |
| C2H4g21419 | 4:27,104,775-27,105,700 | + | - | - | - | - | - | Detail |
| C2H4g02835 | 4:27,106,476-27,108,281 | + | C1H4g11396 | CX4g031475 | LOC_Os04g52920 | Os04g0620200 | GSD1, OsREM6.6, REM6.6 | Detail |
| C2H4g19928 | 4:27,114,110-27,124,400 | + | C1H4g24139 | CX4g032286 | LOC_Os04g52940 | Os04g0620500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019946 | 2:9,893,276-9,896,848 | - | C1H2g10456 | C2H2g12907 | LOC_Os02g18510 | Os02g0286850 | - | Detail |
| CX2g019783 | 2:9,903,489-9,903,868 | - | - | - | LOC_Os02g21120 | - | - | Detail |
| CX2g022175 | 2:9,940,924-9,942,590 | - | C1H2g24590 | C2H2g22028 | LOC_Os02g18550 | Os02g0287000 | - | Detail |
| CX2g023927 | 2:9,968,526-9,968,936 | - | - | - | LOC_Os02g18612 | Os02g0287700 | - | Detail |
| CX2g020374 | 2:9,971,248-9,972,494 | + | C1H2g11192 | C2H2g27895 | LOC_Os02g18620 | Os02g0287800 | - | Detail |
| CX2g019650 | 2:9,974,690-9,975,967 | - | C1H2g17412 | C2H2g27895 | LOC_Os02g18630 | Os02g0287900 | - | Detail |
| CX2g021379 | 2:9,978,398-9,979,651 | - | C1H2g01214 | C2H2g27895 | LOC_Os02g18640 | Os02g0288000 | - | Detail |
| CX2g023220 | 2:9,980,693-9,983,586 | - | C1H2g05642 | C2H2g22070 | LOC_Os02g18650 | Os02g0288100 | - | Detail |
| CX2g018977 | 2:9,987,145-9,988,899 | + | C1H2g19267 | C2H2g19177 | LOC_Os02g18660 | Os02g0288200 | - | Detail |
| CX2g019572 | 2:10,004,515-10,010,154 | - | C1H2g31274 | C2H2g26399 | LOC_Os02g18670 | Os02g0288400 | - | Detail |
| CX2g024446 | 2:10,021,414-10,026,131 | - | C1H2g21282 | C2H2g23610 | LOC_Os02g18690 | Os02g0288600 | - | Detail |
| CX2g019509 | 2:10,036,879-10,042,498 | - | C1H2g14772 | C2H2g06348 | LOC_Os02g18670 | Os02g0288400 | - | Detail |
| CX2g022442 | 2:10,053,740-10,054,501 | + | C1H2g18052 | C2H2g27895 | LOC_Os02g18720 | Os02g0288925 | - | Detail |
| CX2g019590 | 2:10,057,478-10,058,143 | + | C1H2g21282 | C2H2g23610 | LOC_Os02g18690 | Os02g0288600 | - | Detail |
| CX2g021208 | 2:10,064,760-10,065,269 | + | C1H2g00670 | - | - | - | - | Detail |
| CX2g023604 | 2:10,079,154-10,082,621 | + | C1H2g05849 | C2H2g13140 | LOC_Os02g18810 | Os02g0290000 | - | Detail |
| CX2g024285 | 2:10,086,866-10,089,155 | - | C1H2g06145 | C2H2g27765 | - | - | - | Detail |
| CX2g024827 | 2:10,091,507-10,097,586 | - | C1H2g06145 | C2H2g27765 | LOC_Os02g18820 | Os02g0290300 | SLG2 | Detail |
| CX2g018974 | 2:10,099,483-10,099,908 | - | - | - | - | - | - | Detail |
| CX2g024204 | 2:10,104,964-10,107,776 | + | C1H2g17019 | C2H2g17529 | LOC_Os02g18830 | Os02g0290400 | - | Detail |