| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g13560 | 8:19,986,823-19,992,645 | + | C1H8g07439 | CX8g052511 | - | - | - | Detail |
| C2H8g14922 | 8:19,993,084-20,000,538 | - | C1H8g14353 | CX8g054195 | LOC_Os08g37350 | Os08g0478500 | - | Detail |
| C2H8g13231 | 8:20,012,415-20,013,401 | - | C1H8g26214 | CX8g051954 | LOC_Os08g37370 | Os08g0478700 | - | Detail |
| C2H8g10223 | 8:20,020,785-20,026,313 | - | C1H8g21060 | CX8g051387 | LOC_Os08g37380 | Os08g0478800 | - | Detail |
| C2H8g27062 | 8:20,043,309-20,045,662 | + | C1H8g24275 | CX8g052491 | LOC_Os08g37390 | Os08g0479300 | - | Detail |
| C2H8g11298 | 8:20,059,772-20,060,650 | - | C1H8g30791 | CX8g054208 | LOC_Os08g37400 | Os08g0479400 | OsZHD2 | Detail |
| C2H8g07236 | 8:20,093,212-20,093,790 | + | C1H8g13479 | - | - | - | - | Detail |
| C2H8g02187 | 8:20,095,892-20,100,289 | + | C1H8g07368 | CX8g054368 | LOC_Os08g37432 | Os08g0480000 | - | Detail |
| C2H8g16239 | 8:20,100,729-20,105,120 | - | C1H8g08337 | CX8g051529 | LOC_Os08g37444 | Os08g0480100 | - | Detail |
| C2H8g07875 | 8:20,106,802-20,108,665 | - | C1H8g11569 | CX8g051751 | LOC_Os08g37456 | Os08g0480200 | - | Detail |
| C2H8g16349 | 8:20,113,972-20,115,474 | - | C1H8g10824 | CX8g052667 | LOC_Os08g37470 | Os08g0480400 | - | Detail |
| C2H8g25194 | 8:20,126,954-20,128,898 | - | C1H8g07548 | CX8g051045 | LOC_Os08g37480 | Os08g0480500 | - | Detail |
| C2H8g30037 | 8:20,131,391-20,133,619 | + | C1H8g02822 | CX8g051962 | LOC_Os08g37490 | Os08g0480800 | - | Detail |
| C2H8g08023 | 8:20,137,989-20,140,021 | + | C1H8g14557 | CX8g054049 | LOC_Os08g37500 | Os08g0481100 | - | Detail |
| C2H8g29374 | 8:20,141,153-20,143,417 | - | C1H8g18859 | CX8g052069 | LOC_Os08g37520 | Os08g0481000 | - | Detail |
| C2H8g08557 | 8:20,145,848-20,148,248 | - | C1H8g20776 | CX8g050655 | LOC_Os08g37570 | Os08g0481200 | - | Detail |
| C2H8g04351 | 8:20,160,511-20,162,284 | - | C1H8g18729 | CX8g053322 | LOC_Os08g37580 | Os08g0481400 | - | Detail |
| C2H8g16610 | 8:20,171,335-20,171,751 | + | C1H8g30578 | - | - | - | - | Detail |
| C2H8g30027 | 8:20,172,863-20,177,646 | - | C1H8g11865 | CX8g051877 | LOC_Os08g37600 | Os08g0481800 | - | Detail |
| C2H8g21498 | 8:20,179,564-20,180,574 | - | C1H8g01806 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022207 | 2:9,459,294-9,463,799 | + | C1H2g04601 | C2H2g09294 | LOC_Os02g17760 | Os02g0278400 | - | Detail |
| CX2g024163 | 2:9,465,502-9,465,900 | - | C1H2g17404 | - | LOC_Os02g17770 | - | - | Detail |
| CX2g024821 | 2:9,468,204-9,479,235 | - | C1H2g04831 | C2H2g03135 | LOC_Os02g17780 | Os02g0278700 | OsCPS1, OsCPS1<sub>ent</sub> | Detail |
| CX2g020444 | 2:9,502,764-9,504,590 | + | C1H2g21563 | C2H2g23443 | LOC_Os02g17850 | Os02g0279600 | - | Detail |
| CX2g020861 | 2:9,509,433-9,513,989 | + | C1H2g29701 | C2H2g02230 | LOC_Os02g17860 | Os02g0279800 | - | Detail |
| CX2g021610 | 2:9,515,974-9,516,186 | - | C1H2g17404 | - | LOC_Os02g17770 | - | - | Detail |
| CX2g019433 | 2:9,524,447-9,526,139 | - | C1H2g30462 | C2H2g22254 | LOC_Os02g17870 | Os02g0280100 | - | Detail |
| CX2g021534 | 2:9,529,283-9,529,549 | - | - | - | - | - | - | Detail |
| CX2g019485 | 2:9,531,948-9,533,200 | + | C1H2g23928 | C2H2g21745 | LOC_Os02g17880 | Os02g0280200 | - | Detail |
| CX2g023880 | 2:9,536,135-9,537,862 | + | C1H2g15475 | C2H2g22076 | LOC_Os02g17900 | Os02g0280200 | - | Detail |
| CX2g020029 | 2:9,542,522-9,542,674 | - | - | - | - | Os02g0630650 | - | Detail |
| CX2g024365 | 2:9,543,714-9,548,700 | + | C1H2g20630 | C2H2g23290 | LOC_Os02g17910 | Os02g0280400 | - | Detail |
| CX2g024322 | 2:9,551,129-9,553,049 | - | C1H2g27774 | C2H2g01679 | LOC_Os02g17920 | Os02g0280500 | - | Detail |
| CX2g022454 | 2:9,556,308-9,556,562 | - | C1H12g24303 | - | LOC_Os02g24040 | - | - | Detail |
| CX2g022684 | 2:9,563,797-9,565,461 | + | C1H2g22538 | C2H2g01411 | LOC_Os02g17940 | Os02g0280700 | HIS1 | Detail |
| CX2g024670 | 2:9,582,338-9,582,526 | + | - | - | - | - | - | Detail |
| CX2g021215 | 2:9,588,231-9,596,175 | + | C1H2g23738 | C2H2g22053 | LOC_Os02g17970 | Os02g0281000 | - | Detail |
| CX2g022758 | 2:9,598,687-9,599,172 | - | - | - | LOC_Os06g10720 | - | - | Detail |
| CX2g021458 | 2:9,601,383-9,604,514 | + | C1H2g23081 | C2H2g18134 | LOC_Os02g17990 | Os02g0281150 | - | Detail |
| CX2g023725 | 2:9,609,726-9,612,642 | + | C1H2g25896 | C2H2g23947 | LOC_Os05g09570 | - | - | Detail |