| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g29000 | 7:21,070,519-21,071,697 | + | C2H7g13862 | CX7g046308 | LOC_Os07g41590 | Os07g0606800 | - | Detail |
| C1H7g14018 | 7:21,073,936-21,076,688 | - | C2H7g16570 | CX7g047586 | LOC_Os07g41600 | Os07g0606900 | - | Detail |
| C1H7g22152 | 7:21,079,485-21,080,128 | + | - | - | - | - | - | Detail |
| C1H7g10984 | 7:21,104,952-21,105,188 | - | C2H4g06982 | CX4g035592 | LOC_Os04g32980 | Os04g0402500 | - | Detail |
| C1H7g24768 | 7:21,108,864-21,111,746 | - | C2H7g17800 | - | LOC_Os07g41620 | - | - | Detail |
| C1H7g10312 | 7:21,112,080-21,112,679 | - | C2H7g18151 | CX7g049221 | LOC_Os07g41630 | Os07g0607200 | - | Detail |
| C1H7g00238 | 7:21,113,835-21,118,284 | + | C2H7g13245 | CX7g048134 | LOC_Os07g41640 | Os07g0607300 | - | Detail |
| C1H7g08218 | 7:21,119,031-21,121,791 | - | C2H7g18323 | CX7g046476 | LOC_Os07g41650 | Os07g0607400 | - | Detail |
| C1H7g23295 | 7:21,124,752-21,125,922 | - | C2H7g10688 | CX7g047642 | LOC_Os07g41660 | Os07g0607500 | - | Detail |
| C1H7g06818 | 7:21,128,284-21,129,939 | + | C2H7g20778 | CX7g049175 | LOC_Os07g41680 | Os07g0607700 | - | Detail |
| C1H7g03509 | 7:21,139,083-21,142,369 | + | C2H7g06182 | CX7g050268 | LOC_Os07g41694 | Os07g0607800 | - | Detail |
| C1H7g10145 | 7:21,144,876-21,146,614 | + | C2H7g20380 | CX7g048714 | - | - | - | Detail |
| C1H7g08628 | 7:21,148,195-21,150,529 | + | C2H7g07775 | CX7g048960 | LOC_Os07g41710 | Os07g0608100 | - | Detail |
| C1H7g26187 | 7:21,150,878-21,155,390 | - | C2H7g06133 | CX7g048103 | LOC_Os07g41720 | Os07g0608200 | OsNF-YA6, HAP2G | Detail |
| C1H7g09112 | 7:21,163,713-21,167,459 | + | C2H7g06353 | CX7g047265 | LOC_Os07g41730 | Os07g0608300 | - | Detail |
| C1H7g30877 | 7:21,168,400-21,172,539 | + | C2H7g30265 | CX7g049344 | LOC_Os07g41740 | Os07g0608400 | - | Detail |
| C1H7g11823 | 7:21,174,705-21,176,796 | - | C2H7g16246 | CX7g047956 | LOC_Os07g41750 | Os07g0608500 | - | Detail |
| C1H7g31561 | 7:21,178,638-21,180,478 | - | C2H7g19110 | CX3g029764 | LOC_Os07g41790 | Os07g0608700 | - | Detail |
| C1H7g06229 | 7:21,180,738-21,185,121 | + | C2H7g19102 | CX7g046442 | LOC_Os07g41800 | Os07g0608800 | - | Detail |
| C1H7g11766 | 7:21,186,637-21,187,440 | + | C2H7g26217 | CX7g046671 | LOC_Os07g41810 | Os07g0609000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022207 | 2:9,459,294-9,463,799 | + | C1H2g04601 | C2H2g09294 | LOC_Os02g17760 | Os02g0278400 | - | Detail |
| CX2g024163 | 2:9,465,502-9,465,900 | - | C1H2g17404 | - | LOC_Os02g17770 | - | - | Detail |
| CX2g024821 | 2:9,468,204-9,479,235 | - | C1H2g04831 | C2H2g03135 | LOC_Os02g17780 | Os02g0278700 | OsCPS1, OsCPS1<sub>ent</sub> | Detail |
| CX2g020444 | 2:9,502,764-9,504,590 | + | C1H2g21563 | C2H2g23443 | LOC_Os02g17850 | Os02g0279600 | - | Detail |
| CX2g020861 | 2:9,509,433-9,513,989 | + | C1H2g29701 | C2H2g02230 | LOC_Os02g17860 | Os02g0279800 | - | Detail |
| CX2g021610 | 2:9,515,974-9,516,186 | - | C1H2g17404 | - | LOC_Os02g17770 | - | - | Detail |
| CX2g019433 | 2:9,524,447-9,526,139 | - | C1H2g30462 | C2H2g22254 | LOC_Os02g17870 | Os02g0280100 | - | Detail |
| CX2g021534 | 2:9,529,283-9,529,549 | - | - | - | - | - | - | Detail |
| CX2g019485 | 2:9,531,948-9,533,200 | + | C1H2g23928 | C2H2g21745 | LOC_Os02g17880 | Os02g0280200 | - | Detail |
| CX2g023880 | 2:9,536,135-9,537,862 | + | C1H2g15475 | C2H2g22076 | LOC_Os02g17900 | Os02g0280200 | - | Detail |
| CX2g020029 | 2:9,542,522-9,542,674 | - | - | - | - | Os02g0630650 | - | Detail |
| CX2g024365 | 2:9,543,714-9,548,700 | + | C1H2g20630 | C2H2g23290 | LOC_Os02g17910 | Os02g0280400 | - | Detail |
| CX2g024322 | 2:9,551,129-9,553,049 | - | C1H2g27774 | C2H2g01679 | LOC_Os02g17920 | Os02g0280500 | - | Detail |
| CX2g022454 | 2:9,556,308-9,556,562 | - | C1H12g24303 | - | LOC_Os02g24040 | - | - | Detail |
| CX2g022684 | 2:9,563,797-9,565,461 | + | C1H2g22538 | C2H2g01411 | LOC_Os02g17940 | Os02g0280700 | HIS1 | Detail |
| CX2g024670 | 2:9,582,338-9,582,526 | + | - | - | - | - | - | Detail |
| CX2g021215 | 2:9,588,231-9,596,175 | + | C1H2g23738 | C2H2g22053 | LOC_Os02g17970 | Os02g0281000 | - | Detail |
| CX2g022758 | 2:9,598,687-9,599,172 | - | - | - | LOC_Os06g10720 | - | - | Detail |
| CX2g021458 | 2:9,601,383-9,604,514 | + | C1H2g23081 | C2H2g18134 | LOC_Os02g17990 | Os02g0281150 | - | Detail |
| CX2g023725 | 2:9,609,726-9,612,642 | + | C1H2g25896 | C2H2g23947 | LOC_Os05g09570 | - | - | Detail |