| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g03359 | 3:5,792,932-5,793,630 | + | C1H3g23318 | CX3g025280 | LOC_Os03g12440 | - | - | Detail |
| C2H3g24748 | 3:5,794,954-5,802,619 | + | C1H3g17135 | CX3g030046 | LOC_Os03g12450 | Os03g0225500 | - | Detail |
| C2H3g09129 | 3:5,803,343-5,810,016 | + | C1H3g25680 | CX3g028144 | LOC_Os03g12460 | Os03g0225600 | - | Detail |
| C2H3g02566 | 3:5,811,449-5,816,438 | + | C1H3g10808 | CX3g025098 | LOC_Os03g12470 | Os03g0225700 | WAK25, OsWAK25 | Detail |
| C2H3g16646 | 3:5,821,016-5,822,452 | + | C1H3g31142 | CX3g026072 | LOC_Os03g12500 | Os03g0225900 | - | Detail |
| C2H3g10692 | 3:5,829,270-5,830,121 | - | C1H3g02465 | CX3g026153 | LOC_Os03g12510 | Os03g0226200 | Hb2, OsPgb1.2 | Detail |
| C2H3g15869 | 3:5,831,583-5,833,279 | + | C1H3g31559 | CX3g028573 | LOC_Os03g12520 | Os03g0226300 | - | Detail |
| C2H3g08794 | 3:5,833,428-5,834,000 | + | C1H3g14266 | CX3g028573 | LOC_Os03g12520 | Os03g0226300 | - | Detail |
| C2H3g29082 | 3:5,839,492-5,844,120 | + | C1H3g15877 | CX3g027606 | LOC_Os03g12530 | Os03g0226400 | - | Detail |
| C2H3g13286 | 3:5,850,353-5,857,091 | + | C1H3g27940 | CX3g025975 | LOC_Os03g12550 | Os03g0226600 | - | Detail |
| C2H3g30568 | 3:5,857,943-5,859,735 | - | C1H3g15687 | CX3g027982 | LOC_Os03g12560 | Os03g0226700 | - | Detail |
| C2H3g00790 | 3:5,860,981-5,866,764 | + | C1H3g18854 | CX3g024984 | LOC_Os03g12570 | Os03g0226800 | CMT3b | Detail |
| C2H3g22427 | 3:5,867,922-5,870,733 | + | C1H3g26728 | CX3g027871 | LOC_Os03g12570 | Os03g0226901 | - | Detail |
| C2H3g07335 | 3:5,873,669-5,881,089 | + | C1H3g26232 | CX3g030829 | LOC_Os03g12590 | Os03g0227000 | - | Detail |
| C2H3g16667 | 3:5,883,692-5,891,668 | + | C1H3g22048 | CX3g026050 | LOC_Os03g12610 | Os03g0227300 | - | Detail |
| C2H3g04602 | 3:5,891,978-5,893,629 | - | C1H3g19915 | CX3g031339 | LOC_Os03g12620 | Os03g0227400 | - | Detail |
| C2H3g27028 | 3:5,903,063-5,906,526 | + | C1H3g13701 | CX3g027265 | LOC_Os03g12630 | Os03g0227500 | - | Detail |
| C2H3g25912 | 3:5,922,820-5,929,627 | + | C1H3g10637 | CX3g027504 | LOC_Os03g12660 | Os03g0227700 | OsDWF4, OsDWARF4, CYP90B2 | Detail |
| C2H3g15726 | 3:5,931,799-5,936,573 | + | C1H3g00645 | CX3g025096 | LOC_Os03g12670 | Os03g0141200 | OsBMY4 | Detail |
| C2H3g08529 | 3:5,935,003-5,936,506 | - | - | CX3g029136 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005315 | 1:9,689,838-9,691,704 | - | C1H1g10373 | C2H1g23237 | LOC_Os01g19140 | Os01g0295900 | - | Detail |
| CX1g006428 | 1:9,691,739-9,694,797 | - | C1H1g10373 | C2H1g15168 | LOC_Os01g19160 | Os01g0296000 | - | Detail |
| CX1g002769 | 1:9,696,286-9,698,633 | + | C1H1g21926 | C2H1g21823 | LOC_Os01g19150 | Os01g0296100 | - | Detail |
| CX1g004527 | 1:9,704,213-9,705,926 | + | C1H1g30685 | C2H1g25050 | LOC_Os01g19170 | Os01g0296200 | PSL1 | Detail |
| CX1g001795 | 1:9,726,302-9,726,538 | - | - | - | - | - | - | Detail |
| CX1g006429 | 1:9,733,604-9,736,143 | + | C1H1g03525 | C2H1g08175 | LOC_Os01g19220 | Os01g0296700 | - | Detail |
| CX1g007175 | 1:9,739,118-9,745,386 | + | C1H1g03357 | C2H1g19176 | LOC_Os01g19240 | Os01g0296900 | - | Detail |
| CX1g006227 | 1:9,750,210-9,751,871 | + | C1H1g23194 | C2H1g09057 | LOC_Os01g19260 | Os01g0297200 | OsAAA-ATPase2 | Detail |
| CX1g004318 | 1:9,766,177-9,767,448 | - | C1H5g12314 | C2H5g23455 | LOC_Os01g19280 | Os05g0539150 | - | Detail |
| CX1g004800 | 1:9,779,760-9,782,671 | + | C1H1g05646 | C2H1g08850 | LOC_Os01g19290 | Os01g0297700 | - | Detail |
| CX1g002293 | 1:9,791,693-9,791,908 | + | - | - | - | - | - | Detail |
| CX1g000987 | 1:9,792,173-9,792,632 | - | - | C2H2g15841 | - | Os01g0238375 | - | Detail |
| CX1g005490 | 1:9,799,580-9,800,473 | + | C1H1g30123 | C2H1g02664 | LOC_Os01g19330 | Os01g0298400 | Os2R_MYB6 | Detail |
| CX1g002108 | 1:9,812,629-9,813,059 | - | C1H1g23350 | C2H1g08916 | LOC_Os01g19370 | Os01g0299100 | - | Detail |
| CX1g004343 | 1:9,815,539-9,817,469 | + | C1H1g13589 | C2H1g18159 | LOC_Os01g19380 | Os01g0299200 | - | Detail |
| CX1g004126 | 1:9,819,886-9,823,940 | - | C1H1g12729 | C2H1g30139 | LOC_Os01g19390 | Os01g0299300 | - | Detail |
| CX1g006104 | 1:9,827,181-9,827,679 | + | C1H1g22162 | C2H1g27478 | LOC_Os01g19400 | Os01g0299400 | - | Detail |
| CX1g000065 | 1:9,831,124-9,832,704 | - | - | - | LOC_Os01g19410 | Os01g0299500 | - | Detail |
| CX1g003386 | 1:9,836,393-9,837,016 | - | C1H1g29864 | - | LOC_Os01g19430 | Os01g0299700 | - | Detail |
| CX1g001495 | 1:9,840,699-9,841,304 | - | C1H1g29864 | - | LOC_Os01g19430 | Os01g0300000 | - | Detail |