| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g23743 | 1:5,305,835-5,306,335 | - | - | CX1g004127 | LOC_Os01g11240 | Os01g0210600 | - | Detail |
| C2H1g02275 | 1:5,314,040-5,318,157 | + | C1H1g15458 | - | - | Os01g0210750 | - | Detail |
| C2H1g05349 | 1:5,315,079-5,318,927 | - | C1H1g12886 | CX1g002610 | LOC_Os01g11250 | Os01g0210700 | KAT2, OsKAT2 | Detail |
| C2H1g07302 | 1:5,324,139-5,328,648 | + | C1H1g30027 | CX1g004526 | LOC_Os01g11260 | Os01g0210800 | - | Detail |
| C2H1g29439 | 1:5,330,062-5,331,597 | - | C1H1g11954 | CX1g005082 | LOC_Os01g11270 | Os01g0210900 | - | Detail |
| C2H1g23127 | 1:5,353,535-5,355,070 | - | C1H1g11954 | CX1g000827 | LOC_Os01g11300 | Os01g0211200 | - | Detail |
| C2H1g26875 | 1:5,363,256-5,364,782 | - | C1H1g11954 | CX1g005082 | LOC_Os01g11340 | Os01g0211600 | - | Detail |
| C2H1g05400 | 1:5,376,702-5,378,036 | - | C1H1g07906 | - | LOC_Os01g11350 | Os01g0211800 | - | Detail |
| C2H1g30364 | 1:5,392,325-5,404,996 | + | C1H1g25024 | CX1g006413 | LOC_Os01g11370 | Os01g0212100 | - | Detail |
| C2H1g07400 | 1:5,413,173-5,418,384 | + | C1H1g24516 | CX1g004990 | LOC_Os01g11414 | Os01g0212400 | - | Detail |
| C2H1g07852 | 1:5,419,207-5,420,699 | - | C1H1g10197 | CX1g007192 | LOC_Os01g11430 | Os01g0212500 | OsTIE1 | Detail |
| C2H1g19820 | 1:5,428,807-5,429,451 | - | - | - | - | - | - | Detail |
| C2H1g19922 | 1:5,447,110-5,450,771 | - | C1H1g26340 | CX1g001182 | LOC_Os01g11460 | Os01g0212700 | - | Detail |
| C2H1g21565 | 1:5,452,260-5,452,775 | - | C1H1g26340 | CX1g001182 | LOC_Os01g11480 | Os01g0673900 | - | Detail |
| C2H1g00533 | 1:5,455,349-5,456,053 | - | C1H1g22295 | CX1g001182 | LOC_Os01g11490 | Os01g0213100 | - | Detail |
| C2H1g20430 | 1:5,459,163-5,459,843 | - | C1H1g24050 | CX1g001182 | LOC_Os01g11500 | Os01g0213100 | - | Detail |
| C2H1g03845 | 1:5,462,634-5,464,451 | + | - | CX1g000251 | LOC_Os01g11510 | Os01g0213300 | - | Detail |
| C2H1g20281 | 1:5,470,874-5,471,578 | - | C1H1g26340 | CX1g001182 | LOC_Os01g11520 | Os01g0213400 | - | Detail |
| C2H1g27187 | 1:5,486,799-5,488,694 | - | C1H1g28036 | CX1g004394 | LOC_Os01g11550 | Os01g0213800 | OsPCF5, PCF5, OsTCP1, OsTCP1/PCF5 | Detail |
| C2H1g17634 | 1:5,519,687-5,522,015 | - | C1H1g17492 | CX1g003866 | LOC_Os01g11570 | Os01g0214200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005315 | 1:9,689,838-9,691,704 | - | C1H1g10373 | C2H1g23237 | LOC_Os01g19140 | Os01g0295900 | - | Detail |
| CX1g006428 | 1:9,691,739-9,694,797 | - | C1H1g10373 | C2H1g15168 | LOC_Os01g19160 | Os01g0296000 | - | Detail |
| CX1g002769 | 1:9,696,286-9,698,633 | + | C1H1g21926 | C2H1g21823 | LOC_Os01g19150 | Os01g0296100 | - | Detail |
| CX1g004527 | 1:9,704,213-9,705,926 | + | C1H1g30685 | C2H1g25050 | LOC_Os01g19170 | Os01g0296200 | PSL1 | Detail |
| CX1g001795 | 1:9,726,302-9,726,538 | - | - | - | - | - | - | Detail |
| CX1g006429 | 1:9,733,604-9,736,143 | + | C1H1g03525 | C2H1g08175 | LOC_Os01g19220 | Os01g0296700 | - | Detail |
| CX1g007175 | 1:9,739,118-9,745,386 | + | C1H1g03357 | C2H1g19176 | LOC_Os01g19240 | Os01g0296900 | - | Detail |
| CX1g006227 | 1:9,750,210-9,751,871 | + | C1H1g23194 | C2H1g09057 | LOC_Os01g19260 | Os01g0297200 | OsAAA-ATPase2 | Detail |
| CX1g004318 | 1:9,766,177-9,767,448 | - | C1H5g12314 | C2H5g23455 | LOC_Os01g19280 | Os05g0539150 | - | Detail |
| CX1g004800 | 1:9,779,760-9,782,671 | + | C1H1g05646 | C2H1g08850 | LOC_Os01g19290 | Os01g0297700 | - | Detail |
| CX1g002293 | 1:9,791,693-9,791,908 | + | - | - | - | - | - | Detail |
| CX1g000987 | 1:9,792,173-9,792,632 | - | - | C2H2g15841 | - | Os01g0238375 | - | Detail |
| CX1g005490 | 1:9,799,580-9,800,473 | + | C1H1g30123 | C2H1g02664 | LOC_Os01g19330 | Os01g0298400 | Os2R_MYB6 | Detail |
| CX1g002108 | 1:9,812,629-9,813,059 | - | C1H1g23350 | C2H1g08916 | LOC_Os01g19370 | Os01g0299100 | - | Detail |
| CX1g004343 | 1:9,815,539-9,817,469 | + | C1H1g13589 | C2H1g18159 | LOC_Os01g19380 | Os01g0299200 | - | Detail |
| CX1g004126 | 1:9,819,886-9,823,940 | - | C1H1g12729 | C2H1g30139 | LOC_Os01g19390 | Os01g0299300 | - | Detail |
| CX1g006104 | 1:9,827,181-9,827,679 | + | C1H1g22162 | C2H1g27478 | LOC_Os01g19400 | Os01g0299400 | - | Detail |
| CX1g000065 | 1:9,831,124-9,832,704 | - | - | - | LOC_Os01g19410 | Os01g0299500 | - | Detail |
| CX1g003386 | 1:9,836,393-9,837,016 | - | C1H1g29864 | - | LOC_Os01g19430 | Os01g0299700 | - | Detail |
| CX1g001495 | 1:9,840,699-9,841,304 | - | C1H1g29864 | - | LOC_Os01g19430 | Os01g0300000 | - | Detail |