| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g06847 | 12:3,726,298-3,730,813 | - | C2H12g18895 | CX12g015985 | LOC_Os12g07950 | Os12g0179800 | OsSRT2, OsSRT702, OsSIR2b | Detail |
| C1H12g04084 | 12:3,738,794-3,743,701 | + | C2H12g10711 | CX12g017443 | LOC_Os12g07970 | Os12g0180100 | - | Detail |
| C1H12g26935 | 12:3,745,036-3,747,890 | - | C2H12g00531 | CX12g016892 | LOC_Os12g07990 | Os12g0180500 | - | Detail |
| C1H12g24025 | 12:3,756,673-3,757,837 | - | C2H12g26846 | CX12g017341 | LOC_Os12g08070 | Os12g0181300 | - | Detail |
| C1H12g30820 | 12:3,768,726-3,770,682 | + | C2H12g15436 | CX12g015947 | LOC_Os12g08090 | Os12g0181500 | OsAAP11A, AAP11A, OsAAP16, AAP16 | Detail |
| C1H12g24779 | 12:3,781,363-3,783,340 | - | C2H12g22492 | CX12g016463 | LOC_Os12g08090 | Os12g0181500 | OsAAP11A, AAP11A, OsAAP16, AAP16 | Detail |
| C1H12g17913 | 12:3,808,936-3,809,928 | - | C2H12g23384 | - | LOC_Os12g08160 | Os12g0182100 | - | Detail |
| C1H12g10186 | 12:3,810,509-3,815,422 | - | C2H12g19835 | CX12g017548 | LOC_Os12g08170 | Os12g0182200 | - | Detail |
| C1H12g04557 | 12:3,816,928-3,821,271 | - | C2H12g22418 | CX12g017738 | LOC_Os12g08180 | Os12g0182300 | SPL36 | Detail |
| C1H12g20756 | 12:3,831,715-3,832,201 | - | C2H12g16765 | CX12g016669 | LOC_Os12g08210 | Os12g0182600 | - | Detail |
| C1H12g24787 | 12:3,832,708-3,837,115 | + | C2H12g28848 | CX12g016799 | LOC_Os12g08220 | Os12g0182700 | HDAC10, OsHDAC10, HDA714 | Detail |
| C1H12g14015 | 12:3,839,138-3,840,942 | + | C2H12g00347 | CX12g015810 | LOC_Os12g08230 | Os12g0182800 | - | Detail |
| C1H12g08117 | 12:3,843,095-3,847,045 | + | C2H12g26410 | CX12g015556 | LOC_Os12g08260 | Os12g0183100 | - | Detail |
| C1H12g30783 | 12:3,847,171-3,849,960 | - | C2H12g20510 | CX12g017411 | LOC_Os12g08270 | Os12g0183200 | - | Detail |
| C1H12g15428 | 12:3,850,419-3,853,128 | - | C2H12g06987 | CX12g016591 | LOC_Os12g08280 | Os12g0183300 | - | Detail |
| C1H12g25360 | 12:3,890,767-3,895,087 | - | C2H12g09428 | CX12g017314 | LOC_Os12g08700 | Os12g0187800 | - | Detail |
| C1H12g07775 | 12:3,914,303-3,915,960 | + | C2H12g03496 | CX12g016900 | LOC_Os12g08710 | - | - | Detail |
| C1H12g31126 | 12:3,916,414-3,917,061 | + | C2H12g05779 | CX12g015558 | - | - | - | Detail |
| C1H12g06877 | 12:3,929,308-3,933,041 | + | C2H12g27339 | CX12g017927 | LOC_Os12g08720 | Os12g0188500 | - | Detail |
| C1H12g15050 | 12:3,940,161-3,941,149 | - | C2H12g14380 | CX12g015690 | LOC_Os12g08730 | Os12g0188700 | OsTrxm | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005315 | 1:9,689,838-9,691,704 | - | C1H1g10373 | C2H1g23237 | LOC_Os01g19140 | Os01g0295900 | - | Detail |
| CX1g006428 | 1:9,691,739-9,694,797 | - | C1H1g10373 | C2H1g15168 | LOC_Os01g19160 | Os01g0296000 | - | Detail |
| CX1g002769 | 1:9,696,286-9,698,633 | + | C1H1g21926 | C2H1g21823 | LOC_Os01g19150 | Os01g0296100 | - | Detail |
| CX1g004527 | 1:9,704,213-9,705,926 | + | C1H1g30685 | C2H1g25050 | LOC_Os01g19170 | Os01g0296200 | PSL1 | Detail |
| CX1g001795 | 1:9,726,302-9,726,538 | - | - | - | - | - | - | Detail |
| CX1g006429 | 1:9,733,604-9,736,143 | + | C1H1g03525 | C2H1g08175 | LOC_Os01g19220 | Os01g0296700 | - | Detail |
| CX1g007175 | 1:9,739,118-9,745,386 | + | C1H1g03357 | C2H1g19176 | LOC_Os01g19240 | Os01g0296900 | - | Detail |
| CX1g006227 | 1:9,750,210-9,751,871 | + | C1H1g23194 | C2H1g09057 | LOC_Os01g19260 | Os01g0297200 | OsAAA-ATPase2 | Detail |
| CX1g004318 | 1:9,766,177-9,767,448 | - | C1H5g12314 | C2H5g23455 | LOC_Os01g19280 | Os05g0539150 | - | Detail |
| CX1g004800 | 1:9,779,760-9,782,671 | + | C1H1g05646 | C2H1g08850 | LOC_Os01g19290 | Os01g0297700 | - | Detail |
| CX1g002293 | 1:9,791,693-9,791,908 | + | - | - | - | - | - | Detail |
| CX1g000987 | 1:9,792,173-9,792,632 | - | - | C2H2g15841 | - | Os01g0238375 | - | Detail |
| CX1g005490 | 1:9,799,580-9,800,473 | + | C1H1g30123 | C2H1g02664 | LOC_Os01g19330 | Os01g0298400 | Os2R_MYB6 | Detail |
| CX1g002108 | 1:9,812,629-9,813,059 | - | C1H1g23350 | C2H1g08916 | LOC_Os01g19370 | Os01g0299100 | - | Detail |
| CX1g004343 | 1:9,815,539-9,817,469 | + | C1H1g13589 | C2H1g18159 | LOC_Os01g19380 | Os01g0299200 | - | Detail |
| CX1g004126 | 1:9,819,886-9,823,940 | - | C1H1g12729 | C2H1g30139 | LOC_Os01g19390 | Os01g0299300 | - | Detail |
| CX1g006104 | 1:9,827,181-9,827,679 | + | C1H1g22162 | C2H1g27478 | LOC_Os01g19400 | Os01g0299400 | - | Detail |
| CX1g000065 | 1:9,831,124-9,832,704 | - | - | - | LOC_Os01g19410 | Os01g0299500 | - | Detail |
| CX1g003386 | 1:9,836,393-9,837,016 | - | C1H1g29864 | - | LOC_Os01g19430 | Os01g0299700 | - | Detail |
| CX1g001495 | 1:9,840,699-9,841,304 | - | C1H1g29864 | - | LOC_Os01g19430 | Os01g0300000 | - | Detail |