| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g28847 | 9:14,495,660-14,501,828 | + | C1H9g14790 | CX9g056670 | LOC_Os09g28480 | Os09g0458400 | - | Detail |
| C2H9g06834 | 9:14,527,167-14,527,978 | + | C1H9g30078 | - | LOC_Os09g28520 | Os09g0459200 | SG1, OsSG1 | Detail |
| C2H9g17751 | 9:14,547,384-14,551,872 | - | C1H9g01784 | CX9g056105 | LOC_Os09g28560 | Os09g0459600 | - | Detail |
| C2H9g06752 | 9:14,555,807-14,567,696 | + | C1H9g28087 | CX9g057640 | LOC_Os09g28570 | Os09g0459800 | - | Detail |
| C2H9g25937 | 9:14,568,988-14,570,284 | - | C1H9g15128 | CX9g055374 | - | Os09g0459900 | - | Detail |
| C2H9g01353 | 9:14,575,563-14,576,426 | + | C1H9g20930 | CX9g056394 | LOC_Os09g28600 | Os09g0460100 | - | Detail |
| C2H9g17816 | 9:14,579,147-14,588,717 | + | C1H9g17836 | CX9g055971 | LOC_Os09g28610 | Os09g0460200 | - | Detail |
| C2H9g21518 | 9:14,592,660-14,593,598 | + | C1H9g11334 | CX9g055140 | LOC_Os09g28640 | Os09g0460500 | - | Detail |
| C2H9g29988 | 9:14,596,327-14,597,068 | - | - | - | - | - | - | Detail |
| C2H9g26252 | 9:14,598,004-14,598,942 | + | C1H9g08722 | CX9g055140 | LOC_Os09g28650 | Os09g0460700 | - | Detail |
| C2H9g05249 | 9:14,628,687-14,629,661 | - | C1H9g31584 | CX9g055140 | LOC_Os09g28750 | Os09g0462200 | - | Detail |
| C2H9g03017 | 9:14,629,957-14,630,593 | - | C1H9g31193 | - | - | Os09g0462301 | - | Detail |
| C2H9g27701 | 9:14,634,127-14,636,646 | + | C1H9g18452 | CX9g057311 | LOC_Os09g28770 | Os09g0462400 | OsMATL2, OspPLAIIeta, OspPLA-IIalpha | Detail |
| C2H9g19629 | 9:14,637,145-14,639,254 | + | C1H9g29610 | CX9g056435 | LOC_Os09g28780 | - | - | Detail |
| C2H9g05705 | 9:14,650,276-14,654,133 | + | C1H9g28013 | CX9g055048 | LOC_Os09g28810 | Os09g0462700 | - | Detail |
| C2H9g21321 | 9:14,655,361-14,655,770 | + | C1H9g15723 | - | - | Os09g0462850 | - | Detail |
| C2H9g19364 | 9:14,657,776-14,660,369 | - | C1H9g15089 | CX9g057216 | LOC_Os09g28830 | Os09g0462875 | - | Detail |
| C2H9g06754 | 9:14,662,217-14,665,042 | - | C1H9g24460 | CX9g056317 | LOC_Os09g28840 | Os09g0463100 | - | Detail |
| C2H9g23768 | 9:14,665,134-14,667,009 | - | C1H9g24460 | CX9g056317 | LOC_Os09g28840 | - | - | Detail |
| C2H9g26932 | 9:14,677,261-14,679,579 | - | C1H9g16758 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g024765 | 2:9,283,096-9,285,228 | - | C1H2g15131 | C2H2g09655 | LOC_Os02g17400 | Os02g0274200 | - | Detail |
| CX2g020600 | 2:9,287,016-9,287,258 | + | - | - | - | - | - | Detail |
| CX2g020121 | 2:9,298,688-9,301,460 | - | C1H2g04839 | C2H2g06770 | LOC_Os02g17460 | Os02g0274600 | - | Detail |
| CX2g019862 | 2:9,310,554-9,311,640 | + | C1H2g13080 | C2H2g12255 | LOC_Os02g17470 | Os02g0274700 | - | Detail |
| CX2g022073 | 2:9,313,645-9,314,985 | - | - | - | LOC_Os02g17480 | Os02g0288925 | - | Detail |
| CX2g021951 | 2:9,319,446-9,319,760 | - | - | C2H2g23157 | - | - | - | Detail |
| CX2g020679 | 2:9,321,977-9,327,587 | + | C1H2g20851 | C2H2g07148 | LOC_Os02g17500 | Os02g0274900 | - | Detail |
| CX2g021332 | 2:9,333,633-9,334,888 | + | C1H2g27766 | C2H2g16988 | LOC_Os02g17520 | Os02g0275100 | - | Detail |
| CX2g022654 | 2:9,335,723-9,341,830 | - | C1H2g18414 | C2H2g25493 | LOC_Os02g17534 | Os02g0275200 | - | Detail |
| CX2g022452 | 2:9,354,358-9,357,002 | + | C1H2g18414 | C2H2g19414 | LOC_Os02g17600 | Os02g0275200 | - | Detail |
| CX2g024671 | 2:9,357,111-9,357,296 | + | - | - | - | - | - | Detail |
| CX2g024094 | 2:9,364,448-9,369,226 | - | C1H2g28570 | C2H2g11418 | LOC_Os02g17620 | Os02g0276200 | - | Detail |
| CX2g019729 | 2:9,378,275-9,381,116 | - | C1H2g09318 | C2H2g13253 | LOC_Os02g17640 | Os02g0276400 | - | Detail |
| CX2g023106 | 2:9,383,152-9,390,336 | - | C1H2g06211 | C2H2g02640 | LOC_Os02g17650 | Os02g0276500 | OsVTE1 | Detail |
| CX2g019136 | 2:9,390,963-9,391,151 | - | - | - | - | Os02g0630650 | - | Detail |
| CX2g021921 | 2:9,404,768-9,406,268 | + | C1H2g09759 | C2H2g07281 | - | Os02g0332450 | - | Detail |
| CX2g020993 | 2:9,418,722-9,425,633 | - | C1H2g04949 | C2H2g21214 | LOC_Os02g17680 | Os02g0276900 | - | Detail |
| CX2g020060 | 2:9,436,780-9,439,280 | + | C1H2g26261 | C2H2g07248 | LOC_Os11g06800 | Os02g0231600 | - | Detail |
| CX2g023495 | 2:9,442,914-9,448,110 | + | C1H2g06748 | C2H2g23233 | LOC_Os02g17700 | Os02g0277600 | - | Detail |
| CX2g019451 | 2:9,449,000-9,451,598 | - | C1H2g21417 | C2H2g21422 | LOC_Os02g17710 | Os02g0277700 | - | Detail |