| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g02060 | 3:485,335-491,499 | - | C1H3g02926 | CX3g026446 | LOC_Os03g02030 | Os03g0111100 | - | Detail |
| C2H3g10416 | 3:492,780-495,271 | - | C1H3g26294 | CX3g031029 | LOC_Os03g02040 | Os03g0111200 | - | Detail |
| C2H3g28715 | 3:498,296-498,589 | - | C1H3g15608 | CX3g030230 | LOC_Os03g02050 | Os03g0111300 | - | Detail |
| C2H3g08607 | 3:504,319-505,372 | - | C1H3g30842 | CX3g026627 | LOC_Os03g02070 | Os03g0111400 | - | Detail |
| C2H3g00134 | 3:508,909-517,722 | + | C1H3g29372 | CX3g029050 | LOC_Os03g02100 | Os03g0694900 | - | Detail |
| C2H3g12317 | 3:518,627-525,581 | + | C1H3g12244 | CX3g028048 | LOC_Os03g02110 | Os03g0111800 | - | Detail |
| C2H3g29148 | 3:528,162-538,899 | + | C1H3g07282 | CX3g026996 | LOC_Os03g02150 | Os03g0112101 | - | Detail |
| C2H3g00838 | 3:541,524-550,028 | + | C1H3g30522 | CX3g029929 | LOC_Os03g02160 | Os03g0112700 | EHD4, OsC3H20, C3H20, Ehd4 | Detail |
| C2H3g27881 | 3:550,776-555,023 | - | C1H3g07238 | CX3g030050 | LOC_Os03g02170 | Os03g0112800 | STS1 | Detail |
| C2H3g26177 | 3:555,421-557,266 | - | C1H3g09620 | CX3g030634 | LOC_Os03g02180 | Os03g0112900 | OsF5HL2 | Detail |
| C2H3g13014 | 3:562,004-563,679 | - | C1H3g14295 | CX3g025559 | LOC_Os03g02190 | Os03g0113000 | - | Detail |
| C2H3g22975 | 3:566,114-569,005 | + | C1H3g06676 | CX3g028290 | LOC_Os03g02200 | Os03g0113100 | - | Detail |
| C2H3g07317 | 3:570,078-572,543 | + | C1H3g29988 | CX3g026697 | LOC_Os03g02210 | Os03g0113200 | - | Detail |
| C2H3g26703 | 3:581,466-585,763 | - | C1H3g08654 | CX3g028541 | LOC_Os03g02240 | - | - | Detail |
| C2H3g21122 | 3:596,680-601,118 | - | C1H3g00977 | CX3g027292 | LOC_Os03g02260 | Os03g0113700 | - | Detail |
| C2H3g16661 | 3:601,432-606,865 | + | C1H3g24927 | CX3g030810 | LOC_Os03g02270 | Os03g0113800 | - | Detail |
| C2H3g07262 | 3:612,061-612,657 | + | C1H3g15339 | CX3g028218 | LOC_Os03g02280 | Os03g0113900 | OsS40-4 | Detail |
| C2H3g09613 | 3:616,392-622,786 | + | C1H3g18554 | CX3g027517 | LOC_Os03g02290 | Os03g0114000 | - | Detail |
| C2H3g23619 | 3:623,865-624,590 | + | C1H3g18461 | CX3g025737 | LOC_Os03g02300 | Os03g0114100 | - | Detail |
| C2H3g25616 | 3:625,873-627,438 | - | C1H3g30974 | CX3g030259 | LOC_Os03g02310 | Os03g0114200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019061 | 2:9,091,320-9,095,123 | + | C1H2g30652 | C2H2g00807 | LOC_Os02g17190 | Os02g0271900 | Os2R_MYB23 | Detail |
| CX2g022935 | 2:9,105,459-9,106,571 | - | C1H2g28819 | - | LOC_Os02g17210 | Os02g0272100 | - | Detail |
| CX2g022903 | 2:9,114,739-9,116,223 | + | C1H2g30810 | C2H2g30572 | LOC_Os02g17230 | Os02g0272200 | OsYUC12 | Detail |
| CX2g021864 | 2:9,123,034-9,124,866 | + | C1H2g26000 | C2H2g19816 | LOC_Os02g17240 | Os02g0272300 | OsRopGEF3 | Detail |
| CX2g024574 | 2:9,125,608-9,125,997 | + | - | - | - | Os02g0272350 | - | Detail |
| CX2g021838 | 2:9,126,031-9,130,494 | - | C1H2g16365 | C2H2g10400 | LOC_Os02g17250 | Os02g0272400 | - | Detail |
| CX2g019037 | 2:9,137,359-9,137,643 | - | - | - | - | - | - | Detail |
| CX2g018854 | 2:9,143,206-9,143,380 | + | - | - | - | - | - | Detail |
| CX2g021874 | 2:9,145,276-9,150,755 | + | C1H2g26504 | C2H2g09408 | LOC_Os02g17280 | Os02g0272600 | - | Detail |
| CX2g024058 | 2:9,159,549-9,165,849 | + | C1H2g30730 | C2H2g28402 | LOC_Os02g17330 | Os02g0273100 | - | Detail |
| CX2g023275 | 2:9,181,287-9,181,559 | - | - | - | - | Os12g0584700 | - | Detail |
| CX2g020684 | 2:9,195,279-9,202,883 | + | C1H2g21358 | C2H2g06272 | LOC_Os02g17320 | Os02g0273000 | - | Detail |
| CX2g024571 | 2:9,204,307-9,208,662 | + | C1H2g17426 | C2H2g20012 | LOC_Os02g17304 | Os02g0272900 | Xo2 | Detail |
| CX2g021762 | 2:9,209,954-9,210,142 | - | C1H2g30730 | C2H2g28402 | LOC_Os02g17330 | Os02g0273100 | - | Detail |
| CX2g022333 | 2:9,223,339-9,223,512 | - | - | - | - | Os02g0188201 | - | Detail |
| CX2g018979 | 2:9,227,238-9,232,066 | + | C1H2g19815 | C2H2g25389 | LOC_Os02g17350 | Os02g0273700 | - | Detail |
| CX2g021354 | 2:9,237,214-9,240,696 | + | C1H2g20193 | C2H2g20688 | LOC_Os02g18320 | Os02g0609900 | - | Detail |
| CX2g023608 | 2:9,255,827-9,259,465 | - | C1H2g27079 | C2H2g13206 | LOC_Os02g17360 | Os02g0273800 | - | Detail |
| CX2g022716 | 2:9,261,279-9,263,352 | - | C1H2g07174 | C2H2g22699 | LOC_Os02g17370 | Os02g0273900 | - | Detail |
| CX2g024760 | 2:9,274,351-9,282,043 | + | C1H2g00399 | C2H2g22313 | LOC_Os02g17390 | Os02g0274100 | - | Detail |