| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g06554 | 1:1,267,481-1,270,261 | - | C1H1g14698 | CX1g000136 | LOC_Os01g03640 | Os01g0127200 | OsLPR5, OsSTA2 | Detail |
| C2H1g21958 | 1:1,273,959-1,277,999 | - | C1H1g30854 | CX1g005762 | LOC_Os01g03650 | Os01g0127300 | - | Detail |
| C2H1g24576 | 1:1,278,156-1,280,615 | + | C1H1g00412 | CX1g003465 | LOC_Os01g03660 | Os01g0127400 | - | Detail |
| C2H1g17865 | 1:1,282,083-1,282,775 | + | C1H1g25838 | CX1g002042 | LOC_Os01g19970 | Os01g0127450 | - | Detail |
| C2H1g02319 | 1:1,283,305-1,284,401 | + | C1H1g17663 | CX1g005179 | LOC_Os01g03670 | Os01g0127500 | OsTKPR2 | Detail |
| C2H1g19770 | 1:1,285,305-1,285,871 | + | C1H1g11231 | CX1g002886 | LOC_Os01g03680 | Os01g0127600 | - | Detail |
| C2H1g03781 | 1:1,288,272-1,291,329 | + | C1H1g05668 | CX1g006285 | LOC_Os01g03690 | Os01g0127700 | - | Detail |
| C2H1g13836 | 1:1,297,101-1,302,164 | + | C1H1g08835 | CX1g004218 | LOC_Os01g03710 | Os01g0127900 | - | Detail |
| C2H1g25959 | 1:1,312,131-1,313,344 | - | C1H1g25654 | CX1g002896 | LOC_Os01g03720 | Os01g0128000 | MYB1, Os2R_MYB1 | Detail |
| C2H1g01385 | 1:1,324,388-1,326,037 | - | C1H1g31764 | CX1g004405 | LOC_Os01g03740 | Os01g0128100 | - | Detail |
| C2H1g18960 | 1:1,326,807-1,329,714 | + | C1H1g04042 | CX1g004550 | LOC_Os01g03730 | Os01g0128200 | - | Detail |
| C2H1g15883 | 1:1,329,952-1,330,824 | - | C1H1g30874 | CX1g002239 | LOC_Os01g03750 | Os01g0128300 | MHZ4 | Detail |
| C2H1g19347 | 1:1,331,825-1,337,142 | - | C1H1g07436 | CX1g006333 | LOC_Os01g03760 | Os01g0128400 | - | Detail |
| C2H1g18545 | 1:1,345,364-1,353,485 | + | C1H1g20521 | CX1g003056 | LOC_Os01g03820 | Os01g0128800 | - | Detail |
| C2H1g10390 | 1:1,366,798-1,368,202 | + | C1H1g27481 | CX1g002103 | LOC_Os01g03840 | Os01g0129200 | SL1, sl1(t), sl1, stl1, opb, OPB1, ps, PS, OPB | Detail |
| C2H1g17049 | 1:1,379,470-1,382,437 | - | C1H1g30507 | CX1g003490 | LOC_Os01g03870 | Os01g0129500 | - | Detail |
| C2H1g13371 | 1:1,395,250-1,396,259 | + | C1H1g11492 | CX1g006241 | LOC_Os01g03890 | Os01g0129600 | - | Detail |
| C2H1g20654 | 1:1,408,458-1,408,763 | - | - | CX1g003157 | LOC_Os01g03900 | Os01g0129800 | - | Detail |
| C2H1g29639 | 1:1,411,780-1,414,851 | - | C1H1g30416 | CX1g005809 | LOC_Os01g03914 | Os01g0130000 | - | Detail |
| C2H1g19941 | 1:1,416,854-1,417,432 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019327 | 2:8,656,767-8,659,778 | + | C1H2g29991 | C2H2g01960 | LOC_Os02g16040 | Os02g0261100 | UBC5B, OsUBC5b, OsUBC15, UBC15 | Detail |
| CX2g020025 | 2:8,669,623-8,671,041 | + | - | - | LOC_Os02g16050 | - | - | Detail |
| CX2g022234 | 2:8,681,647-8,683,323 | + | C1H2g07409 | C2H2g17385 | LOC_Os02g16060 | Os02g0262800 | - | Detail |
| CX2g019137 | 2:8,697,344-8,699,228 | - | C1H2g19487 | C2H2g28917 | LOC_Os02g16450 | Os02g0264300 | - | Detail |
| CX2g020942 | 2:8,703,540-8,704,307 | + | - | - | LOC_Os02g16480 | - | - | Detail |
| CX2g020509 | 2:8,714,107-8,715,628 | - | C1H2g01441 | C2H2g19236 | LOC_Os02g16500 | Os02g0264800 | - | Detail |
| CX2g020341 | 2:8,735,088-8,736,410 | + | C1H2g28048 | C2H2g18599 | - | Os02g0265200 | - | Detail |
| CX2g020464 | 2:8,744,523-8,749,313 | - | C1H2g03793 | C2H2g26523 | LOC_Os02g16550 | Os02g0265400 | - | Detail |
| CX2g024860 | 2:8,756,034-8,756,189 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g019005 | 2:8,757,865-8,758,489 | - | C1H2g15000 | - | LOC_Os02g16560 | - | - | Detail |
| CX2g024020 | 2:8,764,494-8,769,180 | + | C1H2g01209 | C2H2g05448 | LOC_Os02g16600 | Os02g0265700 | - | Detail |
| CX2g023820 | 2:8,770,384-8,770,998 | + | C1H2g27807 | - | LOC_Os02g16610 | Os02g0265800 | - | Detail |
| CX2g018867 | 2:8,772,607-8,774,890 | + | C1H2g19593 | C2H2g08731 | LOC_Os02g16620 | Os02g0265900 | - | Detail |
| CX2g024509 | 2:8,779,474-8,781,406 | + | C1H2g16850 | C2H2g11052 | LOC_Os02g16630 | Os02g0266000 | - | Detail |
| CX2g020102 | 2:8,782,736-8,784,893 | - | C1H2g16838 | C2H2g16179 | LOC_Os02g17960 | Os02g0266100 | - | Detail |
| CX2g019119 | 2:8,786,458-8,788,975 | + | C1H2g07521 | C2H2g13852 | LOC_Os02g16650 | Os02g0266200 | - | Detail |
| CX2g019965 | 2:8,791,007-8,794,576 | - | C1H2g20133 | C2H2g26198 | LOC_Os02g16660 | Os02g0266300 | - | Detail |
| CX2g021513 | 2:8,799,478-8,806,577 | + | C1H2g23899 | C2H2g01743 | LOC_Os02g16670 | Os02g0266500 | - | Detail |
| CX2g020479 | 2:8,811,309-8,813,986 | - | C1H2g03225 | C2H2g25795 | LOC_Os02g16680 | Os02g0266800 | RISBZ3, RITA1, RITA-1, OsbZIP20 | Detail |
| CX2g020587 | 2:8,823,605-8,827,459 | + | C1H2g13207 | C2H2g08851 | LOC_Os02g16709 | Os02g0267000 | - | Detail |