| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g01750 | 6:23,162,463-23,162,801 | + | C2H6g18614 | CX6g041717 | LOC_Os06g44220 | Os06g0651900 | - | Detail |
| C1H6g04121 | 6:23,166,020-23,175,478 | + | C2H6g04414 | CX6g043732 | LOC_Os06g44230 | Os06g0652000 | OsRpoTp | Detail |
| C1H6g15180 | 6:23,175,958-23,177,889 | + | - | CX6g041247 | LOC_Os06g44240 | Os06g0652100 | - | Detail |
| C1H6g01218 | 6:23,179,016-23,181,683 | - | C2H6g21516 | CX6g041449 | LOC_Os06g44250 | Os06g0652200 | - | Detail |
| C1H6g03050 | 6:23,184,191-23,185,231 | - | C2H6g22019 | CX6g042490 | LOC_Os06g44260 | Os06g0652300 | - | Detail |
| C1H6g02219 | 6:23,193,970-23,195,424 | + | C2H6g18433 | CX6g045070 | LOC_Os06g44270 | Os06g0652400 | - | Detail |
| C1H6g20298 | 6:23,198,091-23,200,919 | + | C2H6g12238 | CX6g042783 | LOC_Os06g44275 | Os06g0652550 | - | Detail |
| C1H6g00728 | 6:23,208,005-23,210,064 | + | - | CX6g041891 | LOC_Os06g44280 | Os06g0652600 | - | Detail |
| C1H6g05074 | 6:23,223,940-23,234,293 | + | C2H6g20360 | CX6g042188 | LOC_Os06g44300 | Os06g0653000 | OsGL1-3 | Detail |
| C1H6g11941 | 6:23,242,761-23,245,384 | + | C2H6g25445 | CX6g042676 | LOC_Os06g44310 | Os06g0653100 | OsTET10 | Detail |
| C1H6g01389 | 6:23,246,764-23,247,904 | - | C2H6g08996 | CX6g045977 | LOC_Os06g44320 | Os06g0653200 | OsbHLH158 | Detail |
| C1H6g00860 | 6:23,258,359-23,259,339 | - | C2H6g05890 | CX6g043383 | LOC_Os06g44370 | Os06g0653800 | - | Detail |
| C1H6g22819 | 6:23,262,471-23,264,165 | - | C2H6g16162 | CX6g042770 | LOC_Os06g44374 | Os06g0653900 | - | Detail |
| C1H6g15277 | 6:23,266,851-23,271,228 | - | C2H6g27303 | CX6g042598 | LOC_Os06g44380 | Os06g0654000 | - | Detail |
| C1H6g18955 | 6:23,286,700-23,292,306 | + | C2H6g25215 | CX6g044147 | LOC_Os06g44410 | Os06g0654300 | MHZ1, OsHK1, MHZ1/OsHK1 | Detail |
| C1H6g06234 | 6:23,308,617-23,309,177 | + | - | CX6g043555 | LOC_Os06g44420 | Os06g0654400 | - | Detail |
| C1H6g09733 | 6:23,312,939-23,314,218 | + | C2H6g29745 | CX6g043668 | LOC_Os06g44430 | Os06g0654600 | - | Detail |
| C1H6g03834 | 6:23,314,635-23,315,198 | + | C2H6g29745 | CX6g043668 | LOC_Os06g44430 | Os06g0660800 | - | Detail |
| C1H6g07146 | 6:23,317,980-23,319,476 | - | C2H6g19072 | CX6g042351 | LOC_Os06g44450 | Os06g0654900 | - | Detail |
| C1H6g07554 | 6:23,329,209-23,334,112 | - | C2H6g00193 | CX6g042826 | LOC_Os06g44460 | Os06g0655100 | OsPGDH3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019327 | 2:8,656,767-8,659,778 | + | C1H2g29991 | C2H2g01960 | LOC_Os02g16040 | Os02g0261100 | UBC5B, OsUBC5b, OsUBC15, UBC15 | Detail |
| CX2g020025 | 2:8,669,623-8,671,041 | + | - | - | LOC_Os02g16050 | - | - | Detail |
| CX2g022234 | 2:8,681,647-8,683,323 | + | C1H2g07409 | C2H2g17385 | LOC_Os02g16060 | Os02g0262800 | - | Detail |
| CX2g019137 | 2:8,697,344-8,699,228 | - | C1H2g19487 | C2H2g28917 | LOC_Os02g16450 | Os02g0264300 | - | Detail |
| CX2g020942 | 2:8,703,540-8,704,307 | + | - | - | LOC_Os02g16480 | - | - | Detail |
| CX2g020509 | 2:8,714,107-8,715,628 | - | C1H2g01441 | C2H2g19236 | LOC_Os02g16500 | Os02g0264800 | - | Detail |
| CX2g020341 | 2:8,735,088-8,736,410 | + | C1H2g28048 | C2H2g18599 | - | Os02g0265200 | - | Detail |
| CX2g020464 | 2:8,744,523-8,749,313 | - | C1H2g03793 | C2H2g26523 | LOC_Os02g16550 | Os02g0265400 | - | Detail |
| CX2g024860 | 2:8,756,034-8,756,189 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g019005 | 2:8,757,865-8,758,489 | - | C1H2g15000 | - | LOC_Os02g16560 | - | - | Detail |
| CX2g024020 | 2:8,764,494-8,769,180 | + | C1H2g01209 | C2H2g05448 | LOC_Os02g16600 | Os02g0265700 | - | Detail |
| CX2g023820 | 2:8,770,384-8,770,998 | + | C1H2g27807 | - | LOC_Os02g16610 | Os02g0265800 | - | Detail |
| CX2g018867 | 2:8,772,607-8,774,890 | + | C1H2g19593 | C2H2g08731 | LOC_Os02g16620 | Os02g0265900 | - | Detail |
| CX2g024509 | 2:8,779,474-8,781,406 | + | C1H2g16850 | C2H2g11052 | LOC_Os02g16630 | Os02g0266000 | - | Detail |
| CX2g020102 | 2:8,782,736-8,784,893 | - | C1H2g16838 | C2H2g16179 | LOC_Os02g17960 | Os02g0266100 | - | Detail |
| CX2g019119 | 2:8,786,458-8,788,975 | + | C1H2g07521 | C2H2g13852 | LOC_Os02g16650 | Os02g0266200 | - | Detail |
| CX2g019965 | 2:8,791,007-8,794,576 | - | C1H2g20133 | C2H2g26198 | LOC_Os02g16660 | Os02g0266300 | - | Detail |
| CX2g021513 | 2:8,799,478-8,806,577 | + | C1H2g23899 | C2H2g01743 | LOC_Os02g16670 | Os02g0266500 | - | Detail |
| CX2g020479 | 2:8,811,309-8,813,986 | - | C1H2g03225 | C2H2g25795 | LOC_Os02g16680 | Os02g0266800 | RISBZ3, RITA1, RITA-1, OsbZIP20 | Detail |
| CX2g020587 | 2:8,823,605-8,827,459 | + | C1H2g13207 | C2H2g08851 | LOC_Os02g16709 | Os02g0267000 | - | Detail |