| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g12302 | 4:27,689,078-27,689,997 | + | C2H4g27530 | CX4g036439 | LOC_Os04g50030 | Os04g0590200 | OsAHL9 | Detail |
| C1H4g16693 | 4:27,695,594-27,697,201 | + | C2H4g00430 | CX4g031650 | LOC_Os04g53120 | Os04g0622600 | Xa1 | Detail |
| C1H4g15194 | 4:27,698,606-27,699,806 | - | C2H4g22065 | CX4g035247 | LOC_Os04g53130 | Os04g0623100 | - | Detail |
| C1H4g02455 | 4:27,713,215-27,713,869 | - | C2H4g00348 | CX4g033709 | - | Os04g0622501 | - | Detail |
| C1H4g21467 | 4:27,726,099-27,727,384 | + | C2H4g08898 | CX4g031650 | LOC_Os04g53160 | Os04g0623066 | - | Detail |
| C1H4g07870 | 4:27,729,783-27,731,823 | - | C2H4g22065 | CX4g035247 | LOC_Os04g53170 | Os04g0623100 | - | Detail |
| C1H4g31518 | 4:27,735,782-27,741,577 | - | C2H4g13216 | CX4g033545 | LOC_Os04g53190 | Os04g0623300 | - | Detail |
| C1H4g28735 | 4:27,749,842-27,752,577 | - | C2H4g00578 | CX4g035759 | LOC_Os04g53200 | Os04g0623400 | - | Detail |
| C1H4g05306 | 4:27,758,196-27,761,940 | + | C2H4g14246 | CX4g032318 | LOC_Os04g53210 | Os04g0623500 | - | Detail |
| C1H4g08239 | 4:27,762,386-27,767,160 | + | C2H4g02179 | CX4g032896 | LOC_Os04g53214 | Os04g0623500 | - | Detail |
| C1H4g06497 | 4:27,768,235-27,770,355 | + | C2H4g17188 | CX4g036610 | LOC_Os04g53220 | Os04g0623700 | - | Detail |
| C1H4g30464 | 4:27,771,258-27,774,047 | + | C2H4g03695 | CX4g033220 | LOC_Os04g53230 | Os04g0623800 | - | Detail |
| C1H4g02029 | 4:27,783,580-27,785,753 | - | C2H4g14747 | CX4g034233 | LOC_Os04g53240 | Os04g0624000 | OsATG8b | Detail |
| C1H4g27906 | 4:27,789,431-27,792,180 | + | C2H4g05270 | CX4g032571 | LOC_Os04g53300 | Os04g0624500 | BH1, Phr1 | Detail |
| C1H4g07313 | 4:27,792,322-27,800,310 | - | C2H4g11126 | CX4g035390 | LOC_Os04g53310 | Os04g0624600 | - | Detail |
| C1H4g13571 | 4:27,805,507-27,806,976 | - | C2H4g28602 | CX4g036647 | LOC_Os04g53330 | Os04g0624800 | - | Detail |
| C1H4g00227 | 4:27,810,761-27,814,396 | - | C2H4g19898 | CX4g033272 | LOC_Os04g53350 | Os04g0625000 | - | Detail |
| C1H4g29072 | 4:27,818,833-27,822,452 | + | C2H4g13433 | CX4g031861 | LOC_Os04g53360 | Os04g0625100 | - | Detail |
| C1H4g19977 | 4:27,827,051-27,828,490 | + | C2H4g25129 | CX4g033103 | LOC_Os04g53370 | Os04g0625200 | - | Detail |
| C1H4g19059 | 4:27,829,014-27,841,558 | - | C2H4g13881 | CX4g032976 | LOC_Os04g53380 | Os04g0625350 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023599 | 2:8,053,020-8,053,373 | + | - | - | LOC_Os02g15130 | - | - | Detail |
| CX2g024165 | 2:8,055,267-8,059,594 | + | C1H2g14225 | C2H2g29796 | LOC_Os02g15140 | Os02g0249500 | - | Detail |
| CX2g020506 | 2:8,073,262-8,075,232 | - | C1H2g31875 | C2H2g27895 | LOC_Os02g15160 | Os02g0249700 | - | Detail |
| CX2g019532 | 2:8,079,391-8,081,210 | - | C1H2g23896 | C2H2g30056 | LOC_Os02g15178 | Os02g0249900 | - | Detail |
| CX2g019611 | 2:8,085,715-8,087,534 | + | C1H2g23896 | C2H2g30056 | LOC_Os02g15169 | Os02g0249800 | - | Detail |
| CX2g024522 | 2:8,103,730-8,104,023 | + | - | - | LOC_Os02g15200 | - | - | Detail |
| CX2g022131 | 2:8,107,020-8,109,317 | + | C1H2g06356 | C2H2g17924 | LOC_Os02g15220 | Os02g0250300 | OsGTE4 | Detail |
| CX2g022354 | 2:8,118,218-8,121,039 | + | C1H2g12357 | C2H2g13396 | LOC_Os02g15230 | Os02g0250400 | BS1, OsGELP33 | Detail |
| CX2g023213 | 2:8,126,797-8,128,209 | - | C1H2g12228 | - | LOC_Os02g15250 | Os02g0250600 | - | Detail |
| CX2g022128 | 2:8,142,019-8,142,354 | - | C1H2g07509 | C2H2g03256 | - | - | - | Detail |
| CX2g023206 | 2:8,147,605-8,148,444 | + | C1H2g16469 | C2H2g19821 | LOC_Os02g15270 | Os02g0251700 | - | Detail |
| CX2g020535 | 2:8,162,285-8,165,303 | - | C1H2g12332 | C2H2g27477 | LOC_Os02g15310 | Os02g0252100 | OsSCL30a | Detail |
| CX2g021498 | 2:8,185,629-8,187,038 | + | C1H2g26833 | C2H2g02364 | LOC_Os02g15340 | Os02g0252200 | - | Detail |
| CX2g020199 | 2:8,192,096-8,193,241 | - | C1H2g16698 | C2H2g11974 | LOC_Os02g15350 | Os02g0252400 | RPBF, OsDof3, OsDOF3, OsEnS-34, OsDof10, Dof10, OsDof-10, OsDOF1, DOF1, DOF3 | Detail |
| CX2g021836 | 2:8,201,226-8,203,473 | - | C1H2g12137 | C2H2g21408 | LOC_Os02g15360 | Os02g0252600 | - | Detail |
| CX2g022222 | 2:8,205,011-8,205,211 | - | - | - | - | Os12g0568166 | - | Detail |
| CX2g024046 | 2:8,212,635-8,214,485 | - | C1H2g17825 | C2H2g22380 | LOC_Os02g15520 | Os02g0254550 | - | Detail |
| CX2g020061 | 2:8,226,544-8,226,969 | - | C1H2g01415 | C2H2g23473 | LOC_Os02g15540 | Os02g0254600 | - | Detail |
| CX2g023976 | 2:8,244,429-8,248,395 | - | C1H2g02874 | C2H2g25388 | LOC_Os02g15550 | Os02g0254700 | - | Detail |
| CX2g021174 | 2:8,262,014-8,269,385 | - | C1H2g18691 | C2H2g17278 | LOC_Os02g15580 | Os02g0255000 | OsCNGC1 | Detail |