| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g07765 | 1:27,213,514-27,217,427 | + | C2H1g28261 | CX1g004752 | LOC_Os01g53000 | Os01g0730300 | - | Detail |
| C1H1g06535 | 1:27,223,577-27,227,045 | - | C2H1g14164 | CX1g000294 | LOC_Os01g53030 | Os01g0730600 | - | Detail |
| C1H1g14431 | 1:27,223,885-27,226,096 | + | C2H1g16061 | CX1g000426 | LOC_Os01g53020 | Os01g0730500 | - | Detail |
| C1H1g09914 | 1:27,235,842-27,236,939 | - | C2H1g00487 | CX1g001404 | LOC_Os01g53040 | Os01g0730700 | OsWRKY14 | Detail |
| C1H1g06745 | 1:27,240,070-27,241,667 | + | C2H1g11513 | CX1g000168 | LOC_Os01g53060 | Os01g0730800 | - | Detail |
| C1H1g24583 | 1:27,242,556-27,248,979 | - | C2H1g14311 | CX1g001666 | LOC_Os01g53070 | Os01g0730900 | - | Detail |
| C1H1g26539 | 1:27,254,399-27,259,561 | - | C2H1g06139 | CX1g001800 | LOC_Os01g53079 | Os01g0731000 | - | Detail |
| C1H1g09554 | 1:27,263,996-27,265,005 | - | C2H1g22498 | - | LOC_Os01g53090 | Os01g0731100 | - | Detail |
| C1H1g05462 | 1:27,271,910-27,272,212 | - | C2H1g25202 | CX1g002698 | LOC_Os01g53130 | Os01g0731800 | - | Detail |
| C1H1g19403 | 1:27,282,303-27,283,163 | + | C2H1g12385 | CX1g005912 | LOC_Os01g53140 | Os01g0750800 | - | Detail |
| C1H1g13195 | 1:27,282,399-27,282,611 | - | C2H1g12212 | CX1g002007 | - | Os01g0732000 | - | Detail |
| C1H1g18233 | 1:27,286,293-27,290,694 | + | C2H1g09330 | CX1g006701 | LOC_Os01g53150 | Os01g0732200 | - | Detail |
| C1H1g17097 | 1:27,307,974-27,310,990 | + | C2H1g23680 | CX1g000356 | LOC_Os01g53200 | Os01g0732700 | YUCCA3, OsYUCCA3 | Detail |
| C1H1g06233 | 1:27,313,980-27,314,318 | - | C2H1g25806 | CX1g002859 | - | - | - | Detail |
| C1H1g02415 | 1:27,320,819-27,321,669 | + | C2H1g04447 | CX1g003483 | LOC_Os01g53220 | Os01g0733200 | OsHsfC1b | Detail |
| C1H1g21238 | 1:27,329,326-27,329,709 | - | C2H1g19099 | CX1g006706 | LOC_Os05g03030 | Os05g0121500 | - | Detail |
| C1H1g25026 | 1:27,334,135-27,336,442 | + | C2H1g23186 | CX1g000184 | LOC_Os01g53240 | Os01g0733500 | - | Detail |
| C1H1g17481 | 1:27,337,443-27,342,915 | - | C2H1g16933 | CX1g001304 | LOC_Os01g53250 | Os01g0733600 | - | Detail |
| C1H1g18098 | 1:27,349,679-27,353,051 | + | C2H1g28398 | CX1g001858 | LOC_Os01g53260 | Os01g0734000 | OsWRKY23 | Detail |
| C1H1g05786 | 1:27,356,992-27,357,542 | + | C2H1g03923 | CX1g006620 | LOC_Os01g53280 | Os01g0734100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023599 | 2:8,053,020-8,053,373 | + | - | - | LOC_Os02g15130 | - | - | Detail |
| CX2g024165 | 2:8,055,267-8,059,594 | + | C1H2g14225 | C2H2g29796 | LOC_Os02g15140 | Os02g0249500 | - | Detail |
| CX2g020506 | 2:8,073,262-8,075,232 | - | C1H2g31875 | C2H2g27895 | LOC_Os02g15160 | Os02g0249700 | - | Detail |
| CX2g019532 | 2:8,079,391-8,081,210 | - | C1H2g23896 | C2H2g30056 | LOC_Os02g15178 | Os02g0249900 | - | Detail |
| CX2g019611 | 2:8,085,715-8,087,534 | + | C1H2g23896 | C2H2g30056 | LOC_Os02g15169 | Os02g0249800 | - | Detail |
| CX2g024522 | 2:8,103,730-8,104,023 | + | - | - | LOC_Os02g15200 | - | - | Detail |
| CX2g022131 | 2:8,107,020-8,109,317 | + | C1H2g06356 | C2H2g17924 | LOC_Os02g15220 | Os02g0250300 | OsGTE4 | Detail |
| CX2g022354 | 2:8,118,218-8,121,039 | + | C1H2g12357 | C2H2g13396 | LOC_Os02g15230 | Os02g0250400 | BS1, OsGELP33 | Detail |
| CX2g023213 | 2:8,126,797-8,128,209 | - | C1H2g12228 | - | LOC_Os02g15250 | Os02g0250600 | - | Detail |
| CX2g022128 | 2:8,142,019-8,142,354 | - | C1H2g07509 | C2H2g03256 | - | - | - | Detail |
| CX2g023206 | 2:8,147,605-8,148,444 | + | C1H2g16469 | C2H2g19821 | LOC_Os02g15270 | Os02g0251700 | - | Detail |
| CX2g020535 | 2:8,162,285-8,165,303 | - | C1H2g12332 | C2H2g27477 | LOC_Os02g15310 | Os02g0252100 | OsSCL30a | Detail |
| CX2g021498 | 2:8,185,629-8,187,038 | + | C1H2g26833 | C2H2g02364 | LOC_Os02g15340 | Os02g0252200 | - | Detail |
| CX2g020199 | 2:8,192,096-8,193,241 | - | C1H2g16698 | C2H2g11974 | LOC_Os02g15350 | Os02g0252400 | RPBF, OsDof3, OsDOF3, OsEnS-34, OsDof10, Dof10, OsDof-10, OsDOF1, DOF1, DOF3 | Detail |
| CX2g021836 | 2:8,201,226-8,203,473 | - | C1H2g12137 | C2H2g21408 | LOC_Os02g15360 | Os02g0252600 | - | Detail |
| CX2g022222 | 2:8,205,011-8,205,211 | - | - | - | - | Os12g0568166 | - | Detail |
| CX2g024046 | 2:8,212,635-8,214,485 | - | C1H2g17825 | C2H2g22380 | LOC_Os02g15520 | Os02g0254550 | - | Detail |
| CX2g020061 | 2:8,226,544-8,226,969 | - | C1H2g01415 | C2H2g23473 | LOC_Os02g15540 | Os02g0254600 | - | Detail |
| CX2g023976 | 2:8,244,429-8,248,395 | - | C1H2g02874 | C2H2g25388 | LOC_Os02g15550 | Os02g0254700 | - | Detail |
| CX2g021174 | 2:8,262,014-8,269,385 | - | C1H2g18691 | C2H2g17278 | LOC_Os02g15580 | Os02g0255000 | OsCNGC1 | Detail |