| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g30640 | 4:1,719,255-1,723,962 | + | C1H4g17799 | CX4g036248 | LOC_Os04g04330 | Os04g0132500 | CTB4a, OsRLCK127, RLCK127 | Detail |
| C2H4g19144 | 4:1,739,532-1,740,113 | - | C1H4g19447 | CX4g034832 | - | - | - | Detail |
| C2H4g05610 | 4:1,764,995-1,767,457 | + | C1H4g23533 | CX4g032097 | LOC_Os04g04750 | Os04g0134800 | - | Detail |
| C2H4g00703 | 4:1,777,022-1,779,592 | - | C1H4g07028 | CX4g035198 | LOC_Os04g04670 | Os04g0125700 | - | Detail |
| C2H4g09916 | 4:1,791,202-1,791,932 | - | C1H4g07028 | CX4g032348 | LOC_Os04g04770 | Os04g0125700 | - | Detail |
| C2H4g15842 | 4:1,841,229-1,843,356 | + | C1H4g07028 | CX4g032198 | LOC_Os04g04670 | Os04g0125700 | - | Detail |
| C2H4g06784 | 4:1,926,268-1,927,874 | + | C1H4g07028 | CX4g034389 | LOC_Os04g04670 | Os04g0136000 | - | Detail |
| C2H4g27188 | 4:1,989,202-1,989,675 | - | - | CX4g032153 | - | - | - | Detail |
| C2H4g18525 | 4:2,014,982-2,015,732 | - | - | CX4g034918 | - | - | - | Detail |
| C2H4g26240 | 4:2,023,261-2,024,654 | - | C1H4g07028 | CX4g032163 | LOC_Os04g05470 | Os04g0125700 | - | Detail |
| C2H4g08696 | 4:2,025,532-2,026,003 | - | C1H4g07028 | CX4g032163 | LOC_Os04g05470 | Os04g0140666 | - | Detail |
| C2H4g14822 | 4:2,053,699-2,054,665 | - | C1H4g07028 | CX4g032348 | LOC_Os04g04770 | Os04g0125700 | - | Detail |
| C2H4g13248 | 4:2,075,582-2,078,396 | - | C1H4g07691 | CX4g036479 | LOC_Os04g05010 | Os04g0136700 | - | Detail |
| C2H4g08946 | 4:2,087,740-2,089,679 | + | C1H4g00435 | CX4g033792 | LOC_Os04g05030 | Os04g0136900 | - | Detail |
| C2H4g24029 | 4:2,119,317-2,124,783 | + | C1H4g17319 | CX4g036173 | LOC_Os04g05050 | Os04g0137201 | OsPLL4.2 | Detail |
| C2H4g03790 | 4:2,139,695-2,140,441 | - | C1H4g22056 | CX4g032910 | LOC_Os04g05070 | Os04g0137450 | - | Detail |
| C2H4g29226 | 4:2,148,952-2,152,002 | + | C1H4g09732 | CX4g033283 | LOC_Os04g05080 | Os04g0137500 | - | Detail |
| C2H4g11106 | 4:2,167,536-2,167,985 | - | - | - | - | - | - | Detail |
| C2H4g03441 | 4:2,178,143-2,186,459 | - | C1H4g13170 | CX4g035554 | LOC_Os04g05470 | Os04g0140400 | - | Detail |
| C2H4g16775 | 4:2,186,503-2,187,141 | - | C1H4g07028 | CX4g035554 | LOC_Os04g05470 | Os04g0140666 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g024811 | 2:7,783,921-7,784,133 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g019387 | 2:7,786,139-7,792,782 | + | C1H2g04614 | C2H2g03367 | LOC_Os02g14730 | Os02g0244300 | OsUBP15, LG1 | Detail |
| CX2g023413 | 2:7,807,792-7,811,710 | + | C1H2g03358 | C2H2g16093 | LOC_Os02g14760 | Os02g0244600 | - | Detail |
| CX2g024516 | 2:7,816,024-7,821,926 | - | C1H2g22490 | C2H2g19401 | LOC_Os02g14770 | Os02g0244700 | - | Detail |
| CX2g019302 | 2:7,842,362-7,844,875 | + | C1H2g00704 | C2H2g11646 | LOC_Os02g14780 | Os02g0245000 | - | Detail |
| CX2g020445 | 2:7,850,691-7,851,665 | - | C1H2g27043 | C2H2g22279 | LOC_Os02g14790 | Os02g0245100 | - | Detail |
| CX2g024730 | 2:7,884,898-7,887,000 | - | C1H2g27792 | C2H2g27609 | LOC_Os02g14810 | Os02g0246500 | - | Detail |
| CX2g021334 | 2:7,893,183-7,894,489 | + | C1H2g19555 | C2H2g06292 | LOC_Os02g14680 | Os02g0243300 | - | Detail |
| CX2g023504 | 2:7,896,018-7,898,125 | - | C1H2g24079 | C2H2g07172 | - | - | - | Detail |
| CX2g024413 | 2:7,899,283-7,903,203 | - | C1H2g19961 | C2H2g07172 | LOC_Os02g14840 | Os02g0245800 | KAT3, OsKAT3 | Detail |
| CX2g023259 | 2:7,915,959-7,918,652 | + | C1H2g04773 | C2H2g25593 | LOC_Os02g14860 | Os02g0246300 | - | Detail |
| CX2g022779 | 2:7,933,709-7,933,867 | + | - | - | - | Os01g0612350 | - | Detail |
| CX2g022523 | 2:7,935,721-7,935,939 | + | - | - | - | - | - | Detail |
| CX2g018855 | 2:7,937,047-7,937,616 | + | C1H2g11045 | - | LOC_Os02g14890 | Os02g0246900 | - | Detail |
| CX2g023708 | 2:7,944,516-7,961,497 | + | C1H2g06267 | C2H2g01600 | LOC_Os02g14900 | Os02g0247000 | - | Detail |
| CX2g020273 | 2:7,968,829-7,970,391 | + | C1H2g24900 | C2H2g06346 | LOC_Os02g14910 | Os02g0247100 | - | Detail |
| CX2g020441 | 2:7,971,205-7,976,067 | - | C1H2g25582 | C2H2g24274 | LOC_Os02g14929 | Os02g0247200 | - | Detail |
| CX2g023290 | 2:7,979,401-7,979,637 | + | - | - | - | - | - | Detail |
| CX2g024304 | 2:7,981,552-7,985,164 | + | C1H2g14183 | C2H2g07955 | LOC_Os02g14980 | Os02g0247800 | - | Detail |
| CX2g020218 | 2:8,047,151-8,047,753 | + | C1H2g19472 | C2H2g02780 | LOC_Os02g15120 | Os02g0249300 | - | Detail |