| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g11621 | 1:28,908,449-28,912,093 | - | C2H1g27726 | CX1g002848 | LOC_Os01g56130 | Os01g0766900 | OsCSLC1 | Detail |
| C1H1g23773 | 1:28,917,622-28,922,860 | - | C2H1g25186 | CX1g006079 | LOC_Os01g56140 | Os01g0767000 | OsNMCP1 | Detail |
| C1H1g07882 | 1:28,924,508-28,928,418 | - | C2H1g12650 | CX1g002490 | LOC_Os01g56150 | Os01g0767100 | - | Detail |
| C1H1g20009 | 1:28,934,059-28,937,050 | + | C2H1g17994 | CX1g005086 | LOC_Os01g56180 | Os01g0767600 | - | Detail |
| C1H1g00590 | 1:28,937,596-28,947,938 | + | C2H1g02356 | CX1g007067 | LOC_Os01g56190 | Os01g0767700 | - | Detail |
| C1H1g02614 | 1:28,954,358-28,957,527 | + | C2H1g28755 | CX1g005068 | LOC_Os01g56200 | Os01g0767900 | - | Detail |
| C1H1g14323 | 1:28,960,257-28,969,822 | - | C2H1g23081 | CX1g000886 | LOC_Os01g45880 | Os01g0646800 | - | Detail |
| C1H1g10000 | 1:28,970,638-28,972,135 | - | C2H1g28135 | CX1g005201 | LOC_Os01g56210 | Os01g0768100 | - | Detail |
| C1H1g17993 | 1:28,973,342-28,979,604 | - | C2H1g30374 | CX1g001137 | LOC_Os01g56230 | Os01g0768200 | - | Detail |
| C1H1g11693 | 1:28,981,958-28,983,986 | - | C2H1g26550 | CX1g002315 | LOC_Os01g56235 | Os01g0768300 | - | Detail |
| C1H1g01409 | 1:28,985,770-28,986,138 | + | C2H1g30140 | CX1g002605 | LOC_Os01g56240 | Os01g0768333 | OsSAUR2 | Detail |
| C1H1g26530 | 1:28,994,882-29,003,824 | + | C2H1g24802 | CX1g000267 | LOC_Os01g56290 | Os01g0768700 | - | Detail |
| C1H1g30094 | 1:29,018,079-29,024,756 | + | C2H1g11170 | CX1g001998 | LOC_Os01g56300 | Os01g0769000 | - | Detail |
| C1H1g21992 | 1:29,025,536-29,028,390 | + | C2H1g06053 | CX1g000941 | LOC_Os01g56310 | Os05g0511500 | - | Detail |
| C1H1g21169 | 1:29,039,506-29,045,221 | + | C2H1g08866 | CX1g000768 | LOC_Os01g56320 | Os01g0769200 | - | Detail |
| C1H1g11804 | 1:29,050,520-29,053,213 | + | C2H1g11294 | CX1g006832 | LOC_Os01g56330 | Os01g0769700 | - | Detail |
| C1H1g24029 | 1:29,055,074-29,061,484 | + | C2H1g27214 | CX1g006851 | LOC_Os01g56350 | Os01g0769900 | TCM1 | Detail |
| C1H1g10932 | 1:29,060,139-29,064,004 | - | C2H1g25114 | CX1g006734 | LOC_Os01g56360 | Os01g0770000 | - | Detail |
| C1H1g12311 | 1:29,066,256-29,072,055 | - | C2H1g18480 | CX1g006846 | LOC_Os01g56360 | Os01g0770000 | - | Detail |
| C1H1g07110 | 1:29,080,501-29,082,096 | - | C2H10g16117 | CX1g000584 | LOC_Os01g56380 | Os01g0770200 | TYDC, TyDC, OsTyDC, OsTYDC, TDC | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g024811 | 2:7,783,921-7,784,133 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g019387 | 2:7,786,139-7,792,782 | + | C1H2g04614 | C2H2g03367 | LOC_Os02g14730 | Os02g0244300 | OsUBP15, LG1 | Detail |
| CX2g023413 | 2:7,807,792-7,811,710 | + | C1H2g03358 | C2H2g16093 | LOC_Os02g14760 | Os02g0244600 | - | Detail |
| CX2g024516 | 2:7,816,024-7,821,926 | - | C1H2g22490 | C2H2g19401 | LOC_Os02g14770 | Os02g0244700 | - | Detail |
| CX2g019302 | 2:7,842,362-7,844,875 | + | C1H2g00704 | C2H2g11646 | LOC_Os02g14780 | Os02g0245000 | - | Detail |
| CX2g020445 | 2:7,850,691-7,851,665 | - | C1H2g27043 | C2H2g22279 | LOC_Os02g14790 | Os02g0245100 | - | Detail |
| CX2g024730 | 2:7,884,898-7,887,000 | - | C1H2g27792 | C2H2g27609 | LOC_Os02g14810 | Os02g0246500 | - | Detail |
| CX2g021334 | 2:7,893,183-7,894,489 | + | C1H2g19555 | C2H2g06292 | LOC_Os02g14680 | Os02g0243300 | - | Detail |
| CX2g023504 | 2:7,896,018-7,898,125 | - | C1H2g24079 | C2H2g07172 | - | - | - | Detail |
| CX2g024413 | 2:7,899,283-7,903,203 | - | C1H2g19961 | C2H2g07172 | LOC_Os02g14840 | Os02g0245800 | KAT3, OsKAT3 | Detail |
| CX2g023259 | 2:7,915,959-7,918,652 | + | C1H2g04773 | C2H2g25593 | LOC_Os02g14860 | Os02g0246300 | - | Detail |
| CX2g022779 | 2:7,933,709-7,933,867 | + | - | - | - | Os01g0612350 | - | Detail |
| CX2g022523 | 2:7,935,721-7,935,939 | + | - | - | - | - | - | Detail |
| CX2g018855 | 2:7,937,047-7,937,616 | + | C1H2g11045 | - | LOC_Os02g14890 | Os02g0246900 | - | Detail |
| CX2g023708 | 2:7,944,516-7,961,497 | + | C1H2g06267 | C2H2g01600 | LOC_Os02g14900 | Os02g0247000 | - | Detail |
| CX2g020273 | 2:7,968,829-7,970,391 | + | C1H2g24900 | C2H2g06346 | LOC_Os02g14910 | Os02g0247100 | - | Detail |
| CX2g020441 | 2:7,971,205-7,976,067 | - | C1H2g25582 | C2H2g24274 | LOC_Os02g14929 | Os02g0247200 | - | Detail |
| CX2g023290 | 2:7,979,401-7,979,637 | + | - | - | - | - | - | Detail |
| CX2g024304 | 2:7,981,552-7,985,164 | + | C1H2g14183 | C2H2g07955 | LOC_Os02g14980 | Os02g0247800 | - | Detail |
| CX2g020218 | 2:8,047,151-8,047,753 | + | C1H2g19472 | C2H2g02780 | LOC_Os02g15120 | Os02g0249300 | - | Detail |