| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g22494 | 5:16,642,716-16,645,805 | - | C1H5g26959 | CX5g038106 | LOC_Os05g33600 | Os05g0405600 | - | Detail |
| C2H5g11829 | 5:16,655,985-16,661,923 | + | C1H5g04085 | CX5g040922 | LOC_Os05g33610 | Os05g0405900 | - | Detail |
| C2H5g25939 | 5:16,663,546-16,666,879 | + | C1H5g22041 | CX5g041090 | LOC_Os05g33620 | Os05g0406000 | - | Detail |
| C2H5g22907 | 5:16,667,446-16,671,338 | - | C1H5g10446 | CX5g040421 | LOC_Os05g33630 | Os05g0406100 | - | Detail |
| C2H5g21437 | 5:16,686,600-16,698,456 | - | C1H5g00299 | CX5g040140 | LOC_Os05g33644 | Os05g0406100 | - | Detail |
| C2H5g07531 | 5:16,713,512-16,714,696 | + | C1H5g09689 | CX5g038444 | LOC_Os05g33690 | Os05g0406800 | - | Detail |
| C2H5g01393 | 5:16,717,738-16,718,662 | - | - | CX5g039242 | - | - | - | Detail |
| C2H5g17544 | 5:16,718,825-16,719,860 | + | C1H5g02644 | CX5g040199 | LOC_Os05g33700 | Os05g0407100 | - | Detail |
| C2H5g09572 | 5:16,720,279-16,728,625 | - | C1H5g06235 | CX5g039305 | LOC_Os05g33710 | Os05g0407200 | - | Detail |
| C2H5g14010 | 5:16,741,952-16,744,658 | + | C1H5g07655 | CX5g040161 | LOC_Os05g33730 | Os05g0407500 | GID1, gid1, OsGID1, Thl, Os GID1 | Detail |
| C2H5g30500 | 5:16,761,498-16,767,214 | - | C1H5g16377 | CX5g040515 | LOC_Os05g33760 | Os05g0407900 | - | Detail |
| C2H5g10487 | 5:16,792,590-16,793,159 | + | - | - | - | - | - | Detail |
| C2H5g11444 | 5:16,793,248-16,801,244 | + | C1H5g18086 | CX5g038802 | LOC_Os05g33810 | Os05g0408200 | OsSPL9 | Detail |
| C2H5g22366 | 5:16,803,441-16,806,745 | - | C1H5g22231 | CX5g040901 | LOC_Os05g33820 | Os05g0408300 | - | Detail |
| C2H5g14510 | 5:16,822,950-16,823,828 | - | C1H5g07753 | CX5g037819 | LOC_Os05g33830 | Os05g0408800 | - | Detail |
| C2H5g20401 | 5:16,826,385-16,826,935 | - | C1H5g01736 | CX5g037932 | LOC_Os05g33910 | Os01g0162101 | - | Detail |
| C2H5g21665 | 5:16,827,319-16,833,393 | - | C1H5g28806 | CX5g039038 | LOC_Os05g33840 | Os05g0408900 | - | Detail |
| C2H5g22578 | 5:16,840,873-16,845,350 | - | C1H5g13458 | CX5g040687 | LOC_Os05g33850 | Os05g0409000 | - | Detail |
| C2H5g22810 | 5:16,848,921-16,849,907 | + | C1H5g23907 | CX5g036877 | LOC_Os05g33860 | Os05g0409100 | - | Detail |
| C2H5g14027 | 5:16,857,988-16,859,428 | + | C1H5g25708 | CX5g038152 | LOC_Os05g33870 | Os05g0409200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g020567 | 2:7,234,263-7,234,538 | - | - | - | - | - | - | Detail |
| CX2g021514 | 2:7,236,263-7,236,760 | + | C1H2g11335 | C2H2g00684 | LOC_Os02g14059 | Os02g0235600 | - | Detail |
| CX2g019513 | 2:7,249,082-7,250,785 | + | C1H2g01987 | - | LOC_Os02g14090 | Os02g0235900 | - | Detail |
| CX2g021939 | 2:7,251,603-7,257,743 | - | C1H2g06088 | C2H2g03069 | LOC_Os02g11760 | Os02g0318500 | - | Detail |
| CX2g024074 | 2:7,272,372-7,274,611 | + | C1H2g31533 | C2H2g00568 | LOC_Os02g13250 | Os02g0785200 | - | Detail |
| CX2g019498 | 2:7,286,806-7,290,912 | + | C1H2g03760 | C2H2g00061 | LOC_Os02g14110 | Os02g0236000 | - | Detail |
| CX2g023765 | 2:7,291,703-7,295,894 | - | C1H2g19802 | C2H2g24513 | LOC_Os02g14120 | Os02g0236100 | Docs1, OsSERL4, OsBAK1-9 | Detail |
| CX2g019107 | 2:7,300,467-7,304,379 | - | C1H2g05695 | C2H2g28619 | LOC_Os02g14130 | Os02g0236200 | OsGSK3 | Detail |
| CX2g021966 | 2:7,314,639-7,315,247 | - | - | - | - | - | - | Detail |
| CX2g020322 | 2:7,336,854-7,338,643 | + | C1H2g28602 | C2H2g00866 | LOC_Os02g14160 | Os02g0236600 | - | Detail |
| CX2g019362 | 2:7,346,939-7,348,096 | + | C1H2g19755 | C2H2g17543 | LOC_Os02g14170 | Os02g0236800 | - | Detail |
| CX2g021683 | 2:7,353,619-7,354,629 | + | C1H2g06366 | C2H2g00866 | LOC_Os02g14180 | Os02g0237000 | - | Detail |
| CX2g019997 | 2:7,356,371-7,359,677 | - | C1H2g20748 | C2H2g01979 | LOC_Os02g14190 | Os02g0237100 | OsACL5 | Detail |
| CX2g024137 | 2:7,421,514-7,421,672 | - | - | - | - | Os05g0505692 | - | Detail |
| CX2g023437 | 2:7,434,392-7,438,747 | - | C1H2g02975 | C2H2g06276 | LOC_Os02g14290 | Os02g0238500 | - | Detail |
| CX2g022393 | 2:7,487,742-7,488,862 | + | - | C2H12g26277 | - | - | - | Detail |
| CX2g019953 | 2:7,538,837-7,539,762 | - | C1H2g00121 | C2H2g11425 | - | - | - | Detail |
| CX2g019389 | 2:7,544,323-7,544,547 | + | - | - | - | - | - | Detail |
| CX2g019801 | 2:7,552,901-7,553,161 | - | - | - | - | - | - | Detail |
| CX2g022670 | 2:7,598,965-7,600,024 | + | C1H2g16166 | C2H2g18657 | LOC_Os02g14160 | Os02g0240100 | OsPrx30 | Detail |