| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g09236 | 1:8,195,800-8,197,582 | - | C2H1g20399 | CX1g001340 | LOC_Os01g16210 | Os01g0267400 | - | Detail |
| C1H1g04981 | 1:8,198,743-8,201,822 | - | C2H1g06019 | CX1g005681 | LOC_Os01g16220 | Os01g0267600 | OsSUN2 | Detail |
| C1H1g28491 | 1:8,216,722-8,219,777 | - | C2H1g16329 | CX1g005936 | LOC_Os01g16240 | Os01g0267900 | OsCam1-3, OsCaM1 | Detail |
| C1H1g11390 | 1:8,223,083-8,230,280 | - | C2H1g07724 | CX1g002499 | LOC_Os01g16260 | Os01g0268100 | - | Detail |
| C1H1g25952 | 1:8,237,281-8,249,395 | + | C2H1g05687 | CX1g003116 | LOC_Os01g16290 | Os01g0268300 | - | Detail |
| C1H1g18249 | 1:8,263,475-8,270,876 | + | C2H1g29340 | CX1g002549 | LOC_Os01g16310 | Os01g0268600 | - | Detail |
| C1H1g26462 | 1:8,271,766-8,272,707 | - | C2H1g26364 | CX1g002307 | LOC_Os01g16320 | Os01g0268700 | - | Detail |
| C1H1g22656 | 1:8,276,743-8,281,899 | + | C2H1g07376 | CX1g005043 | LOC_Os01g16330 | Os01g0268800 | - | Detail |
| C1H1g05590 | 1:8,282,663-8,285,748 | + | C2H1g15881 | CX1g006980 | LOC_Os01g16340 | Os01g0268900 | - | Detail |
| C1H1g03305 | 1:8,286,287-8,296,680 | - | C2H1g26690 | CX1g002921 | LOC_Os01g16350 | Os01g0269100 | - | Detail |
| C1H1g18111 | 1:8,344,138-8,347,511 | - | C2H1g25069 | CX1g006578 | LOC_Os01g16414 | Os01g0269900 | OsARP6 | Detail |
| C1H1g03213 | 1:8,370,604-8,374,729 | - | C2H1g28351 | CX1g001230 | LOC_Os01g16430 | Os01g0270100 | - | Detail |
| C1H1g30414 | 1:8,384,408-8,386,588 | + | C2H1g10510 | CX1g002719 | LOC_Os01g16450 | Os01g0270300 | - | Detail |
| C1H1g20616 | 1:8,393,910-8,395,397 | + | C2H1g29197 | CX1g003971 | LOC_Os01g16470 | Os01g0270700 | - | Detail |
| C1H1g12376 | 1:8,398,917-8,401,448 | + | C2H1g23269 | CX1g005256 | LOC_Os01g16510 | Os01g0271000 | - | Detail |
| C1H1g15294 | 1:8,401,835-8,406,329 | - | C2H1g13171 | CX1g001075 | LOC_Os01g16520 | Os01g0271200 | OsGluRS | Detail |
| C1H1g14438 | 1:8,407,283-8,411,275 | - | C2H1g23197 | CX1g002800 | LOC_Os01g16530 | Os01g0271400 | - | Detail |
| C1H1g27124 | 1:8,413,355-8,417,644 | + | C2H1g08814 | CX1g005031 | LOC_Os01g16540 | Os01g0271500 | - | Detail |
| C1H1g12818 | 1:8,424,103-8,426,572 | - | C2H1g05634 | CX1g005496 | LOC_Os01g16550 | Os01g0271700 | - | Detail |
| C1H1g19269 | 1:8,427,063-8,427,617 | - | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004171 | 1:9,376,320-9,382,657 | + | C1H1g27658 | C2H1g00434 | LOC_Os01g18584 | Os01g0289600 | - | Detail |
| CX1g002031 | 1:9,394,975-9,395,440 | + | C1H1g22558 | C2H1g03295 | LOC_Os01g08220 | Os01g0177400 | D18, d18-h (d18-I, d18h), dwf15, d25, d18, d18-k, d18-AD, d18-dy, OsGA3ox2, ga3ox2, OsGA3OX2, GA3OX2, GA3ox-2 | Detail |
| CX1g002453 | 1:9,409,871-9,411,344 | - | C1H1g31040 | C2H1g15794 | LOC_Os01g18620 | Os01g0289900 | - | Detail |
| CX1g003482 | 1:9,429,238-9,430,748 | - | C1H1g09358 | C2H1g23760 | LOC_Os01g18620 | Os01g0289900 | - | Detail |
| CX1g007116 | 1:9,432,142-9,435,389 | - | C1H1g20536 | C2H1g28620 | LOC_Os01g18630 | Os01g0290000 | - | Detail |
| CX1g001189 | 1:9,436,860-9,440,417 | - | C1H1g06449 | C2H1g18032 | LOC_Os01g18640 | Os01g0290100 | OsLCD1 | Detail |
| CX1g003793 | 1:9,444,905-9,446,335 | + | C1H1g00431 | C2H1g16260 | LOC_Os01g18660 | Os01g0290600 | OsLCD2, OsCS1 | Detail |
| CX1g004035 | 1:9,450,963-9,456,527 | - | C1H1g25669 | C2H1g08075 | LOC_Os01g18670 | Os01g0290700 | - | Detail |
| CX1g000920 | 1:9,465,105-9,465,293 | - | - | - | - | - | - | Detail |
| CX1g000346 | 1:9,483,445-9,487,010 | - | C1H1g08871 | C2H1g00537 | LOC_Os01g18744 | Os01g0291500 | - | Detail |
| CX1g004226 | 1:9,515,968-9,516,303 | + | C1H11g00629 | C2H11g22859 | LOC_Os07g01114 | Os12g0622200 | - | Detail |
| CX1g000147 | 1:9,556,162-9,560,341 | + | C1H1g01604 | C2H1g10238 | LOC_Os01g18800 | Os01g0292200 | - | Detail |
| CX1g001555 | 1:9,569,422-9,570,768 | + | C1H1g22184 | C2H1g11528 | LOC_Os01g18840 | Os01g0292700 | OsIF, OsIFL | Detail |
| CX1g002371 | 1:9,574,187-9,579,536 | + | - | - | LOC_Os01g18850 | Os01g0292900 | - | Detail |
| CX1g003929 | 1:9,580,641-9,581,831 | - | C1H1g00008 | C2H1g10329 | LOC_Os01g18860 | Os01g0293000 | OsSAMS3 | Detail |
| CX1g003845 | 1:9,589,007-9,590,448 | - | C1H1g09181 | C2H1g25441 | LOC_Os01g18870 | Os01g0293100 | OsbHLH142, bHLH142, TIP2 | Detail |
| CX1g007204 | 1:9,594,953-9,596,218 | + | - | C2H1g04775 | LOC_Os01g18880 | Os01g0293200 | - | Detail |
| CX1g000276 | 1:9,677,191-9,678,139 | + | C1H1g22230 | - | - | - | - | Detail |
| CX1g004808 | 1:9,677,571-9,678,373 | - | - | - | - | - | - | Detail |
| CX1g007232 | 1:9,679,790-9,681,842 | - | C1H1g31498 | C2H1g02975 | LOC_Os01g19130 | Os01g0295700 | - | Detail |