| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H8g06348 | 8:21,082,557-21,087,622 | + | C2H8g05178 | CX8g050780 | LOC_Os08g38310 | Os08g0491100 | - | Detail |
| C1H8g25456 | 8:21,089,996-21,093,339 | + | C2H8g28541 | CX8g053598 | LOC_Os08g38320 | Os08g0491200 | OsAGC15 | Detail |
| C1H8g04960 | 8:21,113,821-21,117,860 | + | C2H8g29569 | CX8g051229 | LOC_Os08g38400 | Os08g0492000 | - | Detail |
| C1H8g17962 | 8:21,116,876-21,121,533 | - | C2H8g14481 | CX8g051058 | LOC_Os08g38410 | Os08g0492100 | - | Detail |
| C1H8g14968 | 8:21,136,450-21,141,604 | + | C2H8g17107 | CX8g053439 | LOC_Os08g38440 | Os08g0492400 | - | Detail |
| C1H8g05376 | 8:21,156,904-21,158,223 | + | C2H8g24485 | CX8g050770 | LOC_Os08g38470 | Os08g0493100 | - | Detail |
| C1H8g28101 | 8:21,160,626-21,163,719 | + | C2H8g06574 | CX8g053159 | LOC_Os08g38480 | Os08g0493100 | - | Detail |
| C1H8g31424 | 8:21,172,631-21,174,550 | + | C2H8g28305 | CX8g050770 | LOC_Os08g38540 | Os08g0493100 | - | Detail |
| C1H8g30868 | 8:21,183,183-21,187,918 | + | C2H8g27166 | CX8g053215 | LOC_Os08g38560 | Os08g0493800 | - | Detail |
| C1H8g15304 | 8:21,199,893-21,204,602 | + | C2H8g00865 | CX8g052533 | LOC_Os08g38570 | Os08g0493900 | - | Detail |
| C1H8g00015 | 8:21,207,271-21,209,848 | - | C2H8g27688 | CX8g054540 | LOC_Os08g38590 | Os08g0494100 | MADS62, OsMADS62 | Detail |
| C1H8g02843 | 8:21,212,816-21,216,670 | - | C2H8g18857 | CX8g053586 | LOC_Os08g38600 | Os08g0494300 | - | Detail |
| C1H8g23124 | 8:21,218,148-21,222,396 | + | C2H8g15464 | CX8g053253 | LOC_Os08g38610 | Os08g0494350 | - | Detail |
| C1H8g16308 | 8:21,220,098-21,221,761 | - | - | CX8g053851 | - | Os08g0494375 | - | Detail |
| C1H8g09534 | 8:21,223,009-21,226,005 | + | C2H8g24456 | CX8g053253 | LOC_Os08g38690 | Os08g0495300 | - | Detail |
| C1H8g23517 | 8:21,229,403-21,235,165 | + | C2H8g24456 | CX8g050497 | LOC_Os08g38620 | Os08g0494400 | - | Detail |
| C1H8g19983 | 8:21,236,093-21,237,200 | + | C2H8g09515 | - | LOC_Os08g38620 | Os08g0495300 | - | Detail |
| C1H8g29134 | 8:21,238,526-21,242,439 | + | C2H8g09515 | CX8g050497 | LOC_Os08g38690 | Os08g0495300 | - | Detail |
| C1H8g22999 | 8:21,259,996-21,263,408 | + | C2H8g05900 | CX8g054383 | LOC_Os08g38700 | Os08g0495500 | - | Detail |
| C1H8g31208 | 8:21,276,625-21,277,075 | - | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004171 | 1:9,376,320-9,382,657 | + | C1H1g27658 | C2H1g00434 | LOC_Os01g18584 | Os01g0289600 | - | Detail |
| CX1g002031 | 1:9,394,975-9,395,440 | + | C1H1g22558 | C2H1g03295 | LOC_Os01g08220 | Os01g0177400 | D18, d18-h (d18-I, d18h), dwf15, d25, d18, d18-k, d18-AD, d18-dy, OsGA3ox2, ga3ox2, OsGA3OX2, GA3OX2, GA3ox-2 | Detail |
| CX1g002453 | 1:9,409,871-9,411,344 | - | C1H1g31040 | C2H1g15794 | LOC_Os01g18620 | Os01g0289900 | - | Detail |
| CX1g003482 | 1:9,429,238-9,430,748 | - | C1H1g09358 | C2H1g23760 | LOC_Os01g18620 | Os01g0289900 | - | Detail |
| CX1g007116 | 1:9,432,142-9,435,389 | - | C1H1g20536 | C2H1g28620 | LOC_Os01g18630 | Os01g0290000 | - | Detail |
| CX1g001189 | 1:9,436,860-9,440,417 | - | C1H1g06449 | C2H1g18032 | LOC_Os01g18640 | Os01g0290100 | OsLCD1 | Detail |
| CX1g003793 | 1:9,444,905-9,446,335 | + | C1H1g00431 | C2H1g16260 | LOC_Os01g18660 | Os01g0290600 | OsLCD2, OsCS1 | Detail |
| CX1g004035 | 1:9,450,963-9,456,527 | - | C1H1g25669 | C2H1g08075 | LOC_Os01g18670 | Os01g0290700 | - | Detail |
| CX1g000920 | 1:9,465,105-9,465,293 | - | - | - | - | - | - | Detail |
| CX1g000346 | 1:9,483,445-9,487,010 | - | C1H1g08871 | C2H1g00537 | LOC_Os01g18744 | Os01g0291500 | - | Detail |
| CX1g004226 | 1:9,515,968-9,516,303 | + | C1H11g00629 | C2H11g22859 | LOC_Os07g01114 | Os12g0622200 | - | Detail |
| CX1g000147 | 1:9,556,162-9,560,341 | + | C1H1g01604 | C2H1g10238 | LOC_Os01g18800 | Os01g0292200 | - | Detail |
| CX1g001555 | 1:9,569,422-9,570,768 | + | C1H1g22184 | C2H1g11528 | LOC_Os01g18840 | Os01g0292700 | OsIF, OsIFL | Detail |
| CX1g002371 | 1:9,574,187-9,579,536 | + | - | - | LOC_Os01g18850 | Os01g0292900 | - | Detail |
| CX1g003929 | 1:9,580,641-9,581,831 | - | C1H1g00008 | C2H1g10329 | LOC_Os01g18860 | Os01g0293000 | OsSAMS3 | Detail |
| CX1g003845 | 1:9,589,007-9,590,448 | - | C1H1g09181 | C2H1g25441 | LOC_Os01g18870 | Os01g0293100 | OsbHLH142, bHLH142, TIP2 | Detail |
| CX1g007204 | 1:9,594,953-9,596,218 | + | - | C2H1g04775 | LOC_Os01g18880 | Os01g0293200 | - | Detail |
| CX1g000276 | 1:9,677,191-9,678,139 | + | C1H1g22230 | - | - | - | - | Detail |
| CX1g004808 | 1:9,677,571-9,678,373 | - | - | - | - | - | - | Detail |
| CX1g007232 | 1:9,679,790-9,681,842 | - | C1H1g31498 | C2H1g02975 | LOC_Os01g19130 | Os01g0295700 | - | Detail |