| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g22359 | 7:14,549,011-14,552,735 | - | C2H7g22283 | CX7g046579 | LOC_Os07g29620 | Os07g0479300 | - | Detail |
| C1H7g28663 | 7:14,558,221-14,561,999 | - | C2H7g02658 | CX7g050356 | LOC_Os07g29630 | Os07g0479400 | - | Detail |
| C1H7g07125 | 7:14,563,393-14,564,622 | - | C2H7g18260 | CX7g047765 | LOC_Os07g29640 | Os07g0479600 | - | Detail |
| C1H7g23822 | 7:14,606,861-14,609,191 | + | C2H7g06958 | CX7g046155 | LOC_Os07g29750 | Os07g0480800 | - | Detail |
| C1H7g00019 | 7:14,612,981-14,614,219 | + | C2H7g10462 | CX7g048970 | LOC_Os07g29760 | Os07g0480900 | - | Detail |
| C1H7g31797 | 7:14,619,121-14,624,228 | + | C2H7g05929 | - | LOC_Os07g29770 | Os07g0481000 | - | Detail |
| C1H7g17042 | 7:14,625,310-14,627,496 | - | C2H7g12520 | CX7g047934 | LOC_Os07g29780 | Os07g0481100 | - | Detail |
| C1H7g08825 | 7:14,633,726-14,635,892 | + | C2H7g17914 | CX7g047784 | LOC_Os07g29794 | Os07g0481200 | - | Detail |
| C1H7g01187 | 7:14,640,170-14,644,180 | + | C2H7g08081 | CX7g048988 | LOC_Os07g29810 | Os07g0481300 | - | Detail |
| C1H7g17999 | 7:14,645,802-14,651,436 | - | C2H7g20657 | CX7g046951 | LOC_Os07g29820 | Os07g0481400 | - | Detail |
| C1H7g20643 | 7:14,658,909-14,660,540 | + | C2H7g01767 | CX7g049622 | LOC_Os07g31070 | Os07g0482433 | - | Detail |
| C1H7g25869 | 7:14,678,249-14,682,997 | + | - | - | LOC_Os07g29950 | - | - | Detail |
| C1H7g06741 | 7:14,696,455-14,698,515 | + | C2H7g01767 | CX7g049622 | LOC_Os07g29830 | Os07g0482433 | - | Detail |
| C1H7g25467 | 7:14,778,429-14,780,814 | - | - | - | - | - | - | Detail |
| C1H7g25439 | 7:14,792,306-14,795,015 | - | C2H7g03865 | CX7g046285 | LOC_Os07g29960 | Os07g0482900 | - | Detail |
| C1H7g03895 | 7:14,825,636-14,825,932 | - | - | - | - | - | - | Detail |
| C1H7g27243 | 7:14,825,757-14,827,139 | + | C2H7g21827 | - | - | Os07g0483400 | - | Detail |
| C1H7g00758 | 7:14,828,959-14,831,994 | - | C2H7g12658 | CX7g046925 | LOC_Os07g30020 | Os07g0483500 | - | Detail |
| C1H7g20920 | 7:14,853,677-14,854,456 | + | C2H7g24842 | CX7g049843 | LOC_Os07g30090 | Os07g0484200 | - | Detail |
| C1H7g24417 | 7:14,856,682-14,868,650 | - | C2H7g15400 | CX7g047443 | LOC_Os07g30100 | Os07g0484300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004171 | 1:9,376,320-9,382,657 | + | C1H1g27658 | C2H1g00434 | LOC_Os01g18584 | Os01g0289600 | - | Detail |
| CX1g002031 | 1:9,394,975-9,395,440 | + | C1H1g22558 | C2H1g03295 | LOC_Os01g08220 | Os01g0177400 | D18, d18-h (d18-I, d18h), dwf15, d25, d18, d18-k, d18-AD, d18-dy, OsGA3ox2, ga3ox2, OsGA3OX2, GA3OX2, GA3ox-2 | Detail |
| CX1g002453 | 1:9,409,871-9,411,344 | - | C1H1g31040 | C2H1g15794 | LOC_Os01g18620 | Os01g0289900 | - | Detail |
| CX1g003482 | 1:9,429,238-9,430,748 | - | C1H1g09358 | C2H1g23760 | LOC_Os01g18620 | Os01g0289900 | - | Detail |
| CX1g007116 | 1:9,432,142-9,435,389 | - | C1H1g20536 | C2H1g28620 | LOC_Os01g18630 | Os01g0290000 | - | Detail |
| CX1g001189 | 1:9,436,860-9,440,417 | - | C1H1g06449 | C2H1g18032 | LOC_Os01g18640 | Os01g0290100 | OsLCD1 | Detail |
| CX1g003793 | 1:9,444,905-9,446,335 | + | C1H1g00431 | C2H1g16260 | LOC_Os01g18660 | Os01g0290600 | OsLCD2, OsCS1 | Detail |
| CX1g004035 | 1:9,450,963-9,456,527 | - | C1H1g25669 | C2H1g08075 | LOC_Os01g18670 | Os01g0290700 | - | Detail |
| CX1g000920 | 1:9,465,105-9,465,293 | - | - | - | - | - | - | Detail |
| CX1g000346 | 1:9,483,445-9,487,010 | - | C1H1g08871 | C2H1g00537 | LOC_Os01g18744 | Os01g0291500 | - | Detail |
| CX1g004226 | 1:9,515,968-9,516,303 | + | C1H11g00629 | C2H11g22859 | LOC_Os07g01114 | Os12g0622200 | - | Detail |
| CX1g000147 | 1:9,556,162-9,560,341 | + | C1H1g01604 | C2H1g10238 | LOC_Os01g18800 | Os01g0292200 | - | Detail |
| CX1g001555 | 1:9,569,422-9,570,768 | + | C1H1g22184 | C2H1g11528 | LOC_Os01g18840 | Os01g0292700 | OsIF, OsIFL | Detail |
| CX1g002371 | 1:9,574,187-9,579,536 | + | - | - | LOC_Os01g18850 | Os01g0292900 | - | Detail |
| CX1g003929 | 1:9,580,641-9,581,831 | - | C1H1g00008 | C2H1g10329 | LOC_Os01g18860 | Os01g0293000 | OsSAMS3 | Detail |
| CX1g003845 | 1:9,589,007-9,590,448 | - | C1H1g09181 | C2H1g25441 | LOC_Os01g18870 | Os01g0293100 | OsbHLH142, bHLH142, TIP2 | Detail |
| CX1g007204 | 1:9,594,953-9,596,218 | + | - | C2H1g04775 | LOC_Os01g18880 | Os01g0293200 | - | Detail |
| CX1g000276 | 1:9,677,191-9,678,139 | + | C1H1g22230 | - | - | - | - | Detail |
| CX1g004808 | 1:9,677,571-9,678,373 | - | - | - | - | - | - | Detail |
| CX1g007232 | 1:9,679,790-9,681,842 | - | C1H1g31498 | C2H1g02975 | LOC_Os01g19130 | Os01g0295700 | - | Detail |