| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g15340 | 5:1,779,981-1,784,195 | + | C1H5g15318 | CX5g039240 | LOC_Os05g04520 | Os05g0135800 | RLCK178, OsPti1a, OsRLCK178 | Detail |
| C2H5g09071 | 5:1,784,743-1,786,926 | - | C1H5g22825 | CX5g040556 | LOC_Os05g04530 | Os05g0135900 | - | Detail |
| C2H5g11738 | 5:1,798,378-1,799,442 | + | - | CX5g040743 | LOC_Os05g04540 | Os05g0136100 | - | Detail |
| C2H5g01548 | 5:1,800,699-1,804,493 | - | C1H5g10755 | CX5g039210 | LOC_Os05g04550 | Os05g0136200 | - | Detail |
| C2H5g23155 | 5:1,829,551-1,835,745 | + | C1H5g30580 | CX5g040521 | LOC_Os05g04584 | Os05g0136900 | OsPMT2, OsAT3 | Detail |
| C2H5g15489 | 5:1,843,721-1,844,729 | + | - | - | - | - | - | Detail |
| C2H5g06046 | 5:1,849,609-1,855,994 | + | C1H5g18480 | CX5g040420 | LOC_Os05g04610 | Os05g0137200 | - | Detail |
| C2H5g14079 | 5:1,857,180-1,858,849 | + | C1H5g19392 | CX5g039843 | LOC_Os05g04620 | Os05g0137300 | - | Detail |
| C2H5g14963 | 5:1,859,884-1,863,799 | + | C1H5g26357 | CX5g040603 | LOC_Os05g04630 | Os05g0137400 | - | Detail |
| C2H5g23559 | 5:1,864,493-1,869,943 | - | C1H5g12317 | CX5g036724 | LOC_Os05g04640 | Os05g0137500 | OsWRKY5 | Detail |
| C2H5g03222 | 5:1,881,639-1,882,913 | + | C1H5g04306 | CX5g037574 | LOC_Os05g04650 | Os05g0137600 | - | Detail |
| C2H5g28363 | 5:1,883,175-1,884,682 | - | C1H5g13155 | - | LOC_Os05g04660 | Os05g0137700 | - | Detail |
| C2H5g07352 | 5:1,899,671-1,900,263 | - | C1H5g04433 | CX1g002314 | LOC_Os05g04700 | Os05g0138300 | OsLti6b | Detail |
| C2H5g19962 | 5:1,916,898-1,919,055 | + | C1H5g25088 | CX5g037589 | LOC_Os05g04740 | Os05g0139100 | APG | Detail |
| C2H5g25266 | 5:1,922,063-1,923,286 | - | C1H5g25511 | CX5g037123 | LOC_Os05g04750 | Os05g0139200 | - | Detail |
| C2H5g23665 | 5:1,933,084-1,934,268 | - | C1H5g18751 | CX5g037123 | LOC_Os05g04770 | Os05g0139300 | - | Detail |
| C2H5g30393 | 5:1,934,410-1,935,053 | + | - | - | - | - | - | Detail |
| C2H5g03061 | 5:1,970,541-1,971,097 | - | C1H5g17291 | CX5g038058 | - | Os05g0140000 | - | Detail |
| C2H5g22528 | 5:1,971,471-1,974,178 | + | C1H5g01364 | CX5g041027 | LOC_Os05g04820 | Os05g0140100 | - | Detail |
| C2H5g28238 | 5:1,982,372-1,984,229 | + | C1H1g13588 | CX5g039047 | LOC_Os05g04830 | Os05g0140300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g021073 | 2:7,030,103-7,032,030 | - | C1H2g21921 | C2H2g19547 | LOC_Os02g13810 | Os02g0232100 | HEI10, OsHEI10, HEI10B | Detail |
| CX2g021822 | 2:7,048,102-7,049,554 | + | C1H2g18519 | C2H2g15574 | LOC_Os02g13830 | Os02g0232300 | - | Detail |
| CX2g020086 | 2:7,055,997-7,061,275 | + | C1H2g06533 | C2H2g18136 | LOC_Os02g13840 | Os02g0232400 | - | Detail |
| CX2g021225 | 2:7,067,164-7,078,105 | + | C1H2g27528 | C2H2g14698 | LOC_Os02g13850 | Os02g0232500 | - | Detail |
| CX2g024919 | 2:7,080,100-7,082,375 | - | C1H2g13250 | C2H2g19645 | LOC_Os02g13870 | Os02g0232900 | OsNIP1;1 | Detail |
| CX2g023489 | 2:7,107,422-7,110,530 | + | C1H2g30546 | C2H2g22601 | LOC_Os02g13890 | Os02g0233100 | OsFYVE4 | Detail |
| CX2g019364 | 2:7,127,048-7,131,118 | + | C1H2g28987 | C2H2g30035 | LOC_Os02g13890 | Os02g0233100 | OsFYVE4 | Detail |
| CX2g024004 | 2:7,132,662-7,135,792 | - | C1H2g21840 | C2H2g04696 | LOC_Os02g13900 | Os02g0233200 | OsBES1-4 | Detail |
| CX2g024437 | 2:7,144,777-7,146,570 | - | C1H2g10759 | - | LOC_Os02g13910 | Os02g0233333 | - | Detail |
| CX2g020083 | 2:7,149,035-7,149,193 | + | C1H12g14346 | C2H12g03169 | - | Os02g0696600 | - | Detail |
| CX2g021562 | 2:7,163,051-7,163,386 | - | C1H2g14589 | - | LOC_Os02g13940 | - | - | Detail |
| CX2g024205 | 2:7,166,768-7,171,229 | + | C1H2g05775 | C2H2g02862 | LOC_Os02g13950 | Os02g0234200 | FUWA, OsFUWA | Detail |
| CX2g019637 | 2:7,187,509-7,189,713 | + | C1H2g14103 | C2H2g13549 | LOC_Os02g13960 | Os02g0234300 | OsPUB4 | Detail |
| CX2g023503 | 2:7,193,459-7,195,969 | + | C1H2g31681 | C2H2g18798 | LOC_Os02g13965 | Os02g0234450 | - | Detail |
| CX2g022063 | 2:7,196,744-7,201,330 | + | C1H2g31404 | C2H2g26162 | LOC_Os02g13970 | Os02g0234500 | - | Detail |
| CX2g022725 | 2:7,202,376-7,202,801 | - | C1H2g17271 | C2H2g13426 | LOC_Os02g13980 | Os02g0234700 | - | Detail |
| CX2g022422 | 2:7,205,563-7,208,917 | - | C1H2g04754 | C2H2g07208 | LOC_Os02g13990 | Os02g0234800 | - | Detail |
| CX2g020373 | 2:7,216,012-7,217,702 | + | C1H2g05336 | C2H2g24599 | LOC_Os02g14000 | Os02g0235000 | - | Detail |
| CX2g020878 | 2:7,220,712-7,220,957 | + | - | - | - | - | - | Detail |
| CX2g021315 | 2:7,227,008-7,227,571 | - | C1H2g20932 | C2H2g25219 | - | - | - | Detail |