| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g05622 | 3:28,346,036-28,348,511 | - | C1H3g17674 | CX3g025807 | LOC_Os03g53970 | Os03g0750900 | - | Detail |
| C2H3g27227 | 3:28,354,593-28,355,389 | + | C1H3g30640 | CX3g029898 | LOC_Os03g53980 | Os03g0751000 | - | Detail |
| C2H3g03528 | 3:28,356,604-28,357,468 | - | C1H3g24232 | CX3g026633 | LOC_Os03g61780 | Os03g0221500 | - | Detail |
| C2H3g12979 | 3:28,359,296-28,363,917 | + | C1H3g23380 | CX3g029143 | LOC_Os03g53990 | Os03g0751050 | - | Detail |
| C2H3g03358 | 3:28,364,903-28,368,682 | - | C1H3g12600 | CX3g026203 | LOC_Os03g54000 | Os03g0751100 | - | Detail |
| C2H3g04810 | 3:28,374,612-28,380,038 | + | C1H3g23388 | CX3g028805 | LOC_Os03g54040 | Os03g0751400 | - | Detail |
| C2H3g04305 | 3:28,385,441-28,387,151 | + | C1H3g07489 | CX3g027092 | LOC_Os03g54050 | Os03g0751600 | - | Detail |
| C2H3g09716 | 3:28,394,981-28,400,355 | + | C1H3g19762 | CX3g030127 | LOC_Os03g54084 | Os03g0752100 | PHYC | Detail |
| C2H3g05209 | 3:28,400,892-28,404,773 | + | C1H3g25474 | CX3g031059 | LOC_Os03g54091 | Os03g0752200 | OsSPO11-1, OsTOP6A1 | Detail |
| C2H3g18265 | 3:28,406,229-28,407,037 | - | C1H3g21048 | CX3g026511 | LOC_Os03g54100 | Os03g0752300 | TPKA, TPKa, OsTPKa | Detail |
| C2H3g06363 | 3:28,414,853-28,416,272 | + | C1H3g03067 | CX3g025106 | LOC_Os03g54130 | Os03g0752500 | - | Detail |
| C2H3g21077 | 3:28,417,683-28,421,587 | + | C1H3g23694 | CX3g030009 | LOC_Os03g54150 | Os03g0752700 | - | Detail |
| C2H3g04730 | 3:28,422,062-28,426,447 | - | C1H3g26147 | CX3g031002 | LOC_Os03g54160 | Os03g0753100 | PAP2, MADS34, OsMADS34, RMADS212/RMADS217/RMADS221, OsPAP2/MADS34, MADS34/PAP2 | Detail |
| C2H3g23019 | 3:28,436,282-28,437,780 | - | C1H3g02420 | CX3g026708 | LOC_Os03g54160 | Os03g0752800 | MADS14, OsMADS14, FDRMADS6, RMADS211, AGL10, RAP1B | Detail |
| C2H3g26552 | 3:28,445,807-28,451,302 | - | C1H3g27451 | CX3g031002 | LOC_Os03g54170 | Os03g0753100 | PAP2, MADS34, OsMADS34, RMADS212/RMADS217/RMADS221, OsPAP2/MADS34, MADS34/PAP2 | Detail |
| C2H3g26951 | 3:28,451,740-28,451,928 | - | C1H3g02242 | CX3g031002 | LOC_Os03g54170 | Os03g0753100 | PAP2, MADS34, OsMADS34, RMADS212/RMADS217/RMADS221, OsPAP2/MADS34, MADS34/PAP2 | Detail |
| C2H3g17415 | 3:28,468,540-28,470,560 | - | C1H3g31832 | CX3g030268 | LOC_Os03g54190 | Os03g0753500 | - | Detail |
| C2H3g04287 | 3:28,476,444-28,478,155 | + | C1H3g27471 | CX3g026043 | - | - | - | Detail |
| C2H3g04194 | 3:28,479,652-28,483,328 | - | C1H3g27092 | CX3g027702 | LOC_Os03g54750 | Os03g0754500 | - | Detail |
| C2H3g28760 | 3:28,487,638-28,491,043 | + | C1H3g31483 | CX3g030330 | LOC_Os03g54760 | Os03g0754800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022459 | 2:6,822,042-6,822,557 | - | C1H2g05556 | - | - | Os02g0632700 | - | Detail |
| CX2g021147 | 2:6,824,559-6,827,644 | - | C1H2g16622 | C2H2g05217 | LOC_Os02g13520 | Os02g0228900 | - | Detail |
| CX2g022384 | 2:6,844,007-6,844,805 | + | - | - | - | Os02g0229200 | - | Detail |
| CX2g018941 | 2:6,856,897-6,860,973 | + | C1H2g14306 | C2H2g07545 | LOC_Os02g13560 | Os02g0229400 | - | Detail |
| CX2g021414 | 2:6,862,468-6,868,844 | - | C1H2g11910 | C2H2g14867 | LOC_Os02g13570 | Os02g0229600 | - | Detail |
| CX2g021151 | 2:6,877,609-6,878,496 | + | C1H2g14760 | - | LOC_Os02g13600 | Os02g0229800 | - | Detail |
| CX2g018883 | 2:6,885,316-6,885,867 | + | C1H2g17062 | - | LOC_Os02g13620 | Os02g0229900 | - | Detail |
| CX2g019397 | 2:6,890,998-6,893,745 | + | C1H2g06642 | C2H2g16687 | LOC_Os02g13640 | Os02g0230100 | - | Detail |
| CX2g023887 | 2:6,896,405-6,897,457 | + | C1H2g23074 | - | LOC_Os02g13650 | Os02g0230200 | - | Detail |
| CX2g023129 | 2:6,898,969-6,900,003 | - | C1H2g30749 | C2H2g04097 | LOC_Os02g13660 | Os02g0230300 | RA68 | Detail |
| CX2g024196 | 2:6,909,731-6,910,674 | - | C1H2g30268 | C2H2g00325 | LOC_Os02g13670 | - | - | Detail |
| CX2g023609 | 2:6,915,546-6,916,130 | - | C1H2g00083 | - | - | - | - | Detail |
| CX2g020040 | 2:6,936,797-6,937,537 | + | C1H2g23870 | C2H2g16735 | LOC_Os02g13710 | Os02g0231000 | - | Detail |
| CX2g023806 | 2:6,962,831-6,963,034 | + | - | - | - | - | - | Detail |
| CX2g019653 | 2:6,973,393-6,973,904 | + | - | - | - | - | - | Detail |
| CX2g019086 | 2:6,995,955-6,996,583 | - | C1H2g22450 | C2H2g21959 | LOC_Os02g13760 | Os02g0725500 | - | Detail |
| CX2g021884 | 2:6,998,190-7,000,612 | + | C1H2g27239 | C2H2g01859 | LOC_Os02g13770 | Os02g0231600 | - | Detail |
| CX2g023939 | 2:7,001,398-7,005,101 | - | C1H2g28848 | C2H2g22684 | LOC_Os02g13780 | Os02g0231700 | - | Detail |
| CX2g022986 | 2:7,021,565-7,022,048 | + | - | - | - | - | - | Detail |
| CX2g024068 | 2:7,025,826-7,026,782 | + | C1H2g20826 | C2H2g20008 | LOC_Os02g13800 | Os02g0232000 | - | Detail |