| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g04890 | 9:19,069,124-19,073,047 | + | C2H9g17992 | CX9g056849 | LOC_Os09g39380 | Os09g0567300 | MDHAR, OsMDHAR, OsMDAR3, OsMDHAR3 | Detail |
| C1H9g13266 | 9:19,073,094-19,076,233 | + | C2H9g25680 | CX9g058049 | LOC_Os09g39390 | Os09g0567366 | - | Detail |
| C1H9g16090 | 9:19,078,531-19,081,006 | + | C2H9g00653 | CX9g056022 | LOC_Os09g39400 | Os09g0567400 | - | Detail |
| C1H9g25909 | 9:19,085,026-19,090,786 | + | C2H9g10548 | CX9g057497 | LOC_Os09g39410 | Os09g0567500 | - | Detail |
| C1H9g01897 | 9:19,091,906-19,096,902 | + | C2H9g15634 | CX9g055257 | LOC_Os09g39420 | Os09g0567700 | - | Detail |
| C1H9g27590 | 9:19,096,960-19,100,398 | - | C2H9g07527 | CX9g058075 | LOC_Os09g39430 | Os09g0567800 | - | Detail |
| C1H9g04610 | 9:19,103,896-19,106,558 | - | C2H9g28844 | CX9g058045 | LOC_Os09g39440 | Os09g0567900 | - | Detail |
| C1H9g06631 | 9:19,108,871-19,113,014 | + | C2H9g14034 | CX9g055030 | LOC_Os09g39462 | Os09g0568000 | - | Detail |
| C1H9g15019 | 9:19,113,667-19,113,891 | + | - | CX9g058185 | - | - | - | Detail |
| C1H9g18800 | 9:19,114,406-19,115,801 | + | C2H9g07303 | CX9g055723 | LOC_Os09g39474 | Os09g0568100 | - | Detail |
| C1H9g25533 | 9:19,116,932-19,117,909 | - | C2H9g14146 | CX9g055477 | LOC_Os09g39490 | Os09g0568200 | - | Detail |
| C1H9g00933 | 9:19,121,436-19,122,161 | - | - | CX9g056373 | LOC_Os09g39510 | Os09g0568500 | - | Detail |
| C1H9g05388 | 9:19,125,266-19,125,907 | - | - | CX9g056956 | LOC_Os09g39520 | Os09g0568600 | - | Detail |
| C1H9g08565 | 9:19,127,695-19,128,339 | - | - | CX9g057185 | LOC_Os09g39530 | Os09g0568700 | - | Detail |
| C1H9g27100 | 9:19,129,439-19,130,916 | - | C2H9g28333 | CX9g057377 | LOC_Os09g39540 | Os09g0568800 | - | Detail |
| C1H9g30656 | 9:19,131,188-19,133,085 | + | C2H9g03364 | CX9g055404 | LOC_Os09g39550 | Os09g0568900 | IF1-2, IF<sub>1</sub>-2 | Detail |
| C1H9g22287 | 9:19,134,907-19,136,848 | + | C2H9g03868 | CX9g057720 | LOC_Os09g39560 | Os09g0569100 | - | Detail |
| C1H9g23985 | 9:19,140,226-19,140,612 | + | C2H9g00291 | CX9g057873 | - | - | - | Detail |
| C1H9g14979 | 9:19,141,650-19,145,064 | + | C2H9g00291 | CX9g057873 | LOC_Os09g39570 | Os09g0569200 | - | Detail |
| C1H9g21337 | 9:19,145,011-19,148,481 | - | C2H9g21708 | CX9g056948 | LOC_Os09g39580 | Os09g0569300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022887 | 2:6,647,183-6,648,526 | - | C1H2g24855 | C2H2g19154 | LOC_Os02g13190 | Os02g0225900 | - | Detail |
| CX2g021635 | 2:6,659,454-6,660,764 | - | C1H2g16441 | C2H2g27091 | LOC_Os02g13220 | Os02g0225900 | - | Detail |
| CX2g023835 | 2:6,667,614-6,668,918 | + | C1H2g24185 | C2H2g27091 | LOC_Os02g13260 | Os02g0225900 | - | Detail |
| CX2g021885 | 2:6,671,048-6,673,628 | - | C1H2g29684 | C2H2g12882 | LOC_Os02g13270 | Os02g0226000 | - | Detail |
| CX2g021042 | 2:6,688,124-6,689,098 | + | C1H2g14093 | C2H2g26955 | LOC_Os02g13290 | Os02g0226200 | - | Detail |
| CX2g021388 | 2:6,692,570-6,696,251 | + | C1H2g01064 | C2H2g12216 | LOC_Os02g13300 | Os02g0226300 | - | Detail |
| CX2g024662 | 2:6,698,349-6,699,463 | - | C1H2g16170 | - | - | Os02g0226400 | - | Detail |
| CX2g020162 | 2:6,707,139-6,709,453 | + | C1H2g30402 | C2H2g15932 | LOC_Os02g13310 | Os02g0226600 | - | Detail |
| CX2g021083 | 2:6,715,483-6,715,761 | + | - | - | - | - | - | Detail |
| CX2g022029 | 2:6,721,026-6,721,664 | - | C1H2g00689 | C2H2g08544 | LOC_Os02g13330 | Os02g0226801 | - | Detail |
| CX2g023577 | 2:6,725,719-6,729,515 | + | C1H2g31704 | C2H2g04766 | LOC_Os02g13340 | Os02g0226900 | - | Detail |
| CX2g022100 | 2:6,736,653-6,740,821 | + | C1H2g11270 | C2H2g20793 | LOC_Os02g13360 | Os02g0227000 | - | Detail |
| CX2g024391 | 2:6,741,769-6,743,013 | - | C1H2g06292 | C2H2g16446 | LOC_Os02g13370 | Os02g0227100 | - | Detail |
| CX2g023589 | 2:6,745,081-6,747,315 | - | C1H2g27279 | C2H2g09582 | LOC_Os02g13380 | Os02g0227200 | - | Detail |
| CX2g023337 | 2:6,750,024-6,754,706 | + | C1H2g17086 | C2H2g07399 | LOC_Os02g13400 | Os02g0227400 | - | Detail |
| CX2g024281 | 2:6,764,685-6,764,909 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g024122 | 2:6,765,702-6,768,988 | - | C1H2g27344 | C2H2g27180 | LOC_Os02g13430 | Os02g0227700 | - | Detail |
| CX2g023289 | 2:6,802,172-6,805,372 | - | C1H2g25235 | C2H2g13441 | LOC_Os02g13510 | Os02g0228300 | - | Detail |
| CX2g020589 | 2:6,816,150-6,816,299 | + | - | - | - | Os02g0188201 | - | Detail |
| CX2g023224 | 2:6,820,361-6,820,717 | - | C1H2g23289 | C2H2g22462 | - | Os02g0228600 | - | Detail |