| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g25378 | 3:20,452,482-20,455,494 | - | C1H3g07504 | CX3g028607 | LOC_Os03g40070 | Os03g0597600 | - | Detail |
| C2H3g15708 | 3:20,461,389-20,462,651 | - | C1H3g17059 | CX3g026053 | - | - | - | Detail |
| C2H3g07741 | 3:20,480,584-20,483,529 | + | C1H3g25847 | CX3g025955 | LOC_Os03g40100 | Os03g0598100 | - | Detail |
| C2H3g15953 | 3:20,484,589-20,491,503 | - | C1H3g09764 | CX3g025103 | LOC_Os03g40110 | Os03g0598200 | - | Detail |
| C2H3g29831 | 3:20,498,488-20,500,048 | - | C1H3g00363 | CX3g025618 | LOC_Os03g40130 | - | - | Detail |
| C2H3g27050 | 3:20,562,702-20,564,600 | + | C1H3g19636 | CX3g030408 | LOC_Os03g40170 | Os03g0598700 | - | Detail |
| C2H3g27393 | 3:20,566,699-20,568,075 | - | C1H3g15380 | CX3g029644 | LOC_Os03g40180 | Os03g0598800 | - | Detail |
| C2H3g12187 | 3:20,573,203-20,574,179 | - | C1H3g11506 | CX3g030402 | - | Os03g0598900 | - | Detail |
| C2H3g10707 | 3:20,575,201-20,576,553 | - | C1H3g11506 | CX3g030402 | - | Os03g0598900 | - | Detail |
| C2H3g00333 | 3:20,580,622-20,586,375 | - | C1H3g13942 | CX3g029245 | LOC_Os03g40194 | Os03g0599000 | - | Detail |
| C2H3g29952 | 3:20,608,271-20,615,591 | + | C1H3g30883 | CX3g028471 | LOC_Os03g40260 | Os03g0599600 | - | Detail |
| C2H3g19967 | 3:20,616,868-20,619,410 | - | C1H3g13627 | CX3g027014 | LOC_Os03g40270 | Os03g0599800 | OsUAM1, OsRGP1 | Detail |
| C2H3g19579 | 3:20,645,574-20,646,293 | - | C1H3g04627 | CX3g024993 | LOC_Os03g40310 | Os03g0600400 | - | Detail |
| C2H3g25694 | 3:20,648,601-20,649,812 | - | C1H3g04627 | CX3g024993 | LOC_Os03g40310 | Os03g0670700 | - | Detail |
| C2H3g06551 | 3:20,652,877-20,654,082 | - | C1H3g22498 | CX3g027540 | LOC_Os03g40410 | Os03g0600800 | - | Detail |
| C2H3g24621 | 3:20,663,690-20,665,066 | + | C1H3g25700 | CX3g030021 | LOC_Os03g40400 | Os03g0225100 | MPKK10.2, OsMKK10-2, MKK10-2D | Detail |
| C2H3g19831 | 3:20,668,579-20,669,040 | + | C1H3g25700 | CX3g030021 | LOC_Os03g40400 | Os03g0223000 | - | Detail |
| C2H3g14836 | 3:20,673,311-20,675,119 | - | C1H3g22498 | CX3g030088 | LOC_Os03g40410 | Os03g0601100 | - | Detail |
| C2H3g24556 | 3:20,685,428-20,691,581 | + | C1H3g13282 | CX3g025157 | LOC_Os03g40440 | Os03g0601500 | - | Detail |
| C2H3g15462 | 3:20,704,302-20,705,905 | + | C1H3g27087 | CX3g025024 | LOC_Os03g40330 | Os03g0600600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g020786 | 2:6,437,203-6,439,409 | + | C1H2g18447 | C2H2g22233 | LOC_Os02g12900 | Os02g0222100 | - | Detail |
| CX2g020146 | 2:6,440,758-6,443,829 | + | C1H2g12833 | C2H2g17422 | LOC_Os02g12910 | Os02g0222200 | - | Detail |
| CX2g020872 | 2:6,444,028-6,445,018 | - | - | - | - | Os02g0585566 | - | Detail |
| CX2g020857 | 2:6,445,128-6,445,469 | + | C1H2g15671 | C2H2g08799 | - | Os07g0631500 | - | Detail |
| CX2g024169 | 2:6,451,661-6,452,035 | - | C1H2g03239 | C2H6g27200 | - | - | - | Detail |
| CX2g023402 | 2:6,460,100-6,460,504 | + | - | - | - | Os02g0223200 | - | Detail |
| CX2g023960 | 2:6,460,117-6,461,374 | - | C1H2g17086 | C2H2g07399 | LOC_Os02g13020 | Os02g0223300 | - | Detail |
| CX2g023753 | 2:6,486,180-6,489,239 | + | C1H2g03908 | C2H2g17422 | LOC_Os02g12910 | Os02g0222600 | - | Detail |
| CX2g022883 | 2:6,523,584-6,523,949 | + | C1H11g06426 | C2H4g24180 | LOC_Os02g12460 | Os07g0658500 | - | Detail |
| CX2g021051 | 2:6,535,642-6,536,346 | + | C1H2g24351 | C2H2g08629 | LOC_Os02g13060 | Os02g0223700 | - | Detail |
| CX2g022851 | 2:6,552,182-6,552,355 | - | - | - | - | Os02g0188201 | - | Detail |
| CX2g019831 | 2:6,575,815-6,578,335 | + | C1H2g15757 | C2H2g24144 | LOC_Os02g13100 | Os02g0224100 | - | Detail |
| CX2g021582 | 2:6,583,402-6,583,590 | + | - | - | - | - | - | Detail |
| CX2g018848 | 2:6,584,760-6,591,961 | - | C1H2g08066 | C2H2g03856 | LOC_Os02g13110 | Os02g0224200 | - | Detail |
| CX2g021841 | 2:6,600,731-6,605,922 | + | C1H2g24744 | C2H2g10494 | LOC_Os02g13130 | Os02g0224300 | - | Detail |
| CX2g019171 | 2:6,606,996-6,614,784 | + | C1H2g17132 | C2H2g14478 | LOC_Os02g13140 | Os02g0224400 | - | Detail |
| CX2g020820 | 2:6,626,960-6,630,967 | + | C1H2g26512 | C2H2g07309 | LOC_Os02g13150 | Os02g0224800 | - | Detail |
| CX2g019652 | 2:6,633,413-6,638,323 | - | C1H2g03138 | C2H2g08849 | LOC_Os02g13160 | Os02g0224900 | - | Detail |
| CX2g022426 | 2:6,638,839-6,643,848 | + | C1H2g19767 | C2H2g16941 | LOC_Os02g13170 | Os02g0225000 | - | Detail |
| CX2g020135 | 2:6,644,511-6,645,113 | + | C1H2g11782 | C2H2g16941 | LOC_Os02g13180 | Os02g0225100 | - | Detail |