| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g29455 | 4:30,653,474-30,656,535 | + | C1H4g14998 | CX4g035598 | LOC_Os04g59520 | Os04g0691800 | - | Detail |
| C2H4g04978 | 4:30,668,698-30,673,821 | + | C1H4g13678 | CX4g033130 | LOC_Os04g59540 | Os04g0691900 | - | Detail |
| C2H4g28407 | 4:30,674,106-30,676,744 | - | C1H4g04015 | CX4g031823 | LOC_Os04g59550 | Os04g0692000 | OsUGT1 | Detail |
| C2H4g21280 | 4:30,677,851-30,681,052 | - | C1H4g24413 | CX4g036186 | LOC_Os04g59560 | Os04g0692100 | - | Detail |
| C2H4g27640 | 4:30,680,738-30,683,347 | + | C1H4g28170 | CX4g033569 | LOC_Os04g59570 | Os04g0692200 | - | Detail |
| C2H4g06229 | 4:30,684,603-30,685,276 | - | C1H4g17325 | - | - | - | - | Detail |
| C2H4g24464 | 4:30,686,159-30,688,119 | - | C1H4g17325 | CX4g035439 | LOC_Os04g59580 | Os04g0692300 | - | Detail |
| C2H4g23702 | 4:30,690,396-30,694,589 | + | C1H4g04446 | CX4g032662 | LOC_Os04g59590 | Os04g0692400 | - | Detail |
| C2H4g12817 | 4:30,695,208-30,695,486 | + | C1H4g10612 | CX4g032652 | - | - | - | Detail |
| C2H4g22022 | 4:30,695,620-30,700,573 | + | C1H4g10612 | CX4g032652 | LOC_Os04g59600 | Os04g0692500 | - | Detail |
| C2H4g12422 | 4:30,700,751-30,715,073 | - | C1H4g21901 | CX4g032746 | LOC_Os04g59624 | Os04g0692700 | ENL1L | Detail |
| C2H4g05853 | 4:30,717,551-30,720,686 | + | C1H4g31227 | CX4g032881 | LOC_Os04g59630 | Os04g0692800 | - | Detail |
| C2H4g28247 | 4:30,721,624-30,723,426 | + | C1H4g07535 | CX4g034118 | - | Os04g0165600 | - | Detail |
| C2H4g27143 | 4:30,724,840-30,727,367 | - | C1H4g19873 | CX4g036051 | - | Os04g0373000 | - | Detail |
| C2H4g07206 | 4:30,727,606-30,728,510 | - | C1H4g00863 | CX4g032375 | - | Os04g0436100 | OsACOT | Detail |
| C2H4g13259 | 4:30,728,625-30,730,439 | + | C1H4g30889 | CX4g036354 | - | Os04g0693200 | - | Detail |
| C2H4g13673 | 4:30,733,287-30,735,182 | - | C1H4g22032 | CX4g036240 | - | Os04g0693300 | - | Detail |
| C2H4g15271 | 4:30,738,225-30,741,349 | - | C1H4g01478 | CX4g033358 | - | Os04g0470100 | - | Detail |
| C2H4g00725 | 4:30,742,683-30,749,700 | - | C1H4g15633 | CX4g032528 | - | Os04g0109900 | - | Detail |
| C2H4g20081 | 4:30,755,131-30,761,983 | + | C1H4g02481 | CX4g031982 | - | Os04g0693100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023095 | 2:6,249,561-6,250,865 | - | C1H2g22168 | C2H2g01092 | LOC_Os02g12710 | Os02g0219050 | - | Detail |
| CX2g024197 | 2:6,267,598-6,271,843 | - | C1H2g02339 | C2H2g08176 | LOC_Os02g12730 | Os02g0219200 | - | Detail |
| CX2g024846 | 2:6,280,236-6,283,915 | - | C1H2g22063 | C2H2g25287 | LOC_Os02g12740 | Os02g0219400 | OsGPI8 | Detail |
| CX2g024479 | 2:6,285,369-6,287,942 | + | C1H2g00777 | C2H2g26355 | LOC_Os02g12750 | Os02g0219800 | OsTET2 | Detail |
| CX2g021650 | 2:6,288,799-6,291,210 | - | C1H2g30667 | C2H2g23365 | LOC_Os02g12760 | Os02g0219900 | - | Detail |
| CX2g021673 | 2:6,291,661-6,291,816 | + | - | - | LOC_Os02g13210 | - | - | Detail |
| CX2g022173 | 2:6,296,736-6,296,981 | + | - | - | - | - | - | Detail |
| CX2g018925 | 2:6,298,146-6,298,322 | + | - | - | - | - | - | Detail |
| CX2g022104 | 2:6,299,442-6,301,246 | + | C1H2g24521 | C2H2g09377 | LOC_Os02g12780 | Os02g0220000 | OsCKX6 | Detail |
| CX2g022995 | 2:6,314,004-6,316,103 | + | C1H2g15795 | C2H2g12835 | LOC_Os02g12780 | Os02g0220100 | OsCKX7 | Detail |
| CX2g024290 | 2:6,328,543-6,329,940 | - | C1H2g30241 | C2H2g28607 | LOC_Os02g12790 | Os02g0220400 | CGA1, Cga1, OsCga1, OsCGA1, OsGATA11, GATA11 | Detail |
| CX2g019563 | 2:6,339,423-6,342,303 | + | C1H2g23503 | C2H2g14333 | LOC_Os02g12794 | Os02g0220500 | - | Detail |
| CX2g019782 | 2:6,345,290-6,348,718 | + | C1H2g00344 | C2H2g18250 | LOC_Os02g12800 | Os02g0220600 | - | Detail |
| CX2g024312 | 2:6,350,004-6,356,319 | - | C1H2g04441 | C2H2g03696 | LOC_Os02g12810 | Os02g0220700 | - | Detail |
| CX2g024912 | 2:6,365,988-6,371,045 | - | C1H2g21438 | C2H2g00523 | LOC_Os02g12820 | Os02g0221100 | - | Detail |
| CX2g022115 | 2:6,396,471-6,400,602 | + | C1H2g12870 | C2H2g11540 | LOC_Os02g12840 | Os02g0221300 | - | Detail |
| CX2g023110 | 2:6,411,602-6,414,755 | - | C1H2g13065 | C2H2g13827 | LOC_Os02g12850 | Os02g0221500 | - | Detail |
| CX2g021581 | 2:6,417,663-6,420,895 | + | C1H2g20786 | C2H2g10410 | LOC_Os02g12870 | Os02g0221600 | - | Detail |
| CX2g021336 | 2:6,424,388-6,427,588 | + | C1H2g10087 | C2H2g06088 | LOC_Os02g12880 | Os02g0221800 | - | Detail |
| CX2g021518 | 2:6,428,567-6,430,728 | - | C1H2g03914 | C2H2g18416 | LOC_Os02g12890 | Os02g0221900 | - | Detail |