| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g27460 | 5:5,518,925-5,523,295 | - | C2H5g00233 | CX5g039127 | LOC_Os05g11810 | Os05g0208550 | - | Detail |
| C1H5g07351 | 5:5,537,030-5,542,179 | - | C2H5g13507 | CX5g038870 | LOC_Os05g11850 | Os05g0209100 | - | Detail |
| C1H5g03790 | 5:5,555,029-5,557,419 | + | C2H5g11847 | CX5g040486 | LOC_Os05g11870 | Os05g0209400 | - | Detail |
| C1H5g13449 | 5:5,559,751-5,560,127 | + | C2H5g12685 | CX5g039069 | LOC_Os05g11900 | Os05g0209500 | - | Detail |
| C1H5g21872 | 5:5,581,058-5,584,730 | + | C2H5g24011 | CX5g041109 | LOC_Os05g11910 | Os05g0209600 | OsGELP63 | Detail |
| C1H5g04532 | 5:5,588,551-5,589,006 | + | C2H5g19454 | CX5g040492 | - | - | - | Detail |
| C1H5g29109 | 5:5,616,732-5,619,475 | + | C2H5g23138 | CX5g039081 | LOC_Os05g11950 | Os05g0210100 | MHZ11 | Detail |
| C1H5g13016 | 5:5,624,918-5,628,717 | + | C2H5g20303 | CX5g037430 | LOC_Os05g11970 | Os05g0210400 | - | Detail |
| C1H5g08574 | 5:5,629,579-5,639,187 | - | C2H5g23217 | CX5g037283 | LOC_Os05g11980 | Os05g0210500 | - | Detail |
| C1H5g03321 | 5:5,644,507-5,648,669 | + | C2H5g17500 | CX5g037259 | LOC_Os05g11990 | Os05g0210600 | - | Detail |
| C1H5g18726 | 5:5,669,364-5,671,326 | - | C2H5g28388 | CX5g040841 | LOC_Os05g12040 | Os05g0211100 | CYP51G3, OsCYP51G3 | Detail |
| C1H5g21608 | 5:5,706,932-5,709,965 | - | C2H5g07820 | CX5g040101 | LOC_Os05g12140 | Os05g0212200 | - | Detail |
| C1H5g08793 | 5:5,724,767-5,727,500 | - | C2H5g25273 | CX5g039223 | LOC_Os05g12150 | Os05g0212300 | - | Detail |
| C1H5g26139 | 5:5,738,094-5,746,123 | - | C2H5g13514 | CX5g038195 | LOC_Os05g12170 | Os05g0212400 | - | Detail |
| C1H5g19607 | 5:5,746,994-5,747,540 | - | C2H5g01965 | - | - | - | - | Detail |
| C1H5g26297 | 5:5,750,699-5,753,162 | - | C2H5g15911 | CX5g037296 | LOC_Os05g12180 | Os05g0213100 | - | Detail |
| C1H5g08566 | 5:5,756,512-5,757,189 | - | - | - | - | - | - | Detail |
| C1H5g01652 | 5:5,757,721-5,758,596 | - | C2H5g09878 | CX5g038452 | LOC_Os05g12180 | Os05g0213100 | - | Detail |
| C1H5g23027 | 5:5,771,660-5,774,077 | - | C2H5g09878 | CX5g038452 | LOC_Os05g12210 | Os05g0212900 | - | Detail |
| C1H5g09718 | 5:5,792,531-5,794,724 | - | C2H5g17769 | CX5g037631 | LOC_Os05g12240 | Os05g0213100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023095 | 2:6,249,561-6,250,865 | - | C1H2g22168 | C2H2g01092 | LOC_Os02g12710 | Os02g0219050 | - | Detail |
| CX2g024197 | 2:6,267,598-6,271,843 | - | C1H2g02339 | C2H2g08176 | LOC_Os02g12730 | Os02g0219200 | - | Detail |
| CX2g024846 | 2:6,280,236-6,283,915 | - | C1H2g22063 | C2H2g25287 | LOC_Os02g12740 | Os02g0219400 | OsGPI8 | Detail |
| CX2g024479 | 2:6,285,369-6,287,942 | + | C1H2g00777 | C2H2g26355 | LOC_Os02g12750 | Os02g0219800 | OsTET2 | Detail |
| CX2g021650 | 2:6,288,799-6,291,210 | - | C1H2g30667 | C2H2g23365 | LOC_Os02g12760 | Os02g0219900 | - | Detail |
| CX2g021673 | 2:6,291,661-6,291,816 | + | - | - | LOC_Os02g13210 | - | - | Detail |
| CX2g022173 | 2:6,296,736-6,296,981 | + | - | - | - | - | - | Detail |
| CX2g018925 | 2:6,298,146-6,298,322 | + | - | - | - | - | - | Detail |
| CX2g022104 | 2:6,299,442-6,301,246 | + | C1H2g24521 | C2H2g09377 | LOC_Os02g12780 | Os02g0220000 | OsCKX6 | Detail |
| CX2g022995 | 2:6,314,004-6,316,103 | + | C1H2g15795 | C2H2g12835 | LOC_Os02g12780 | Os02g0220100 | OsCKX7 | Detail |
| CX2g024290 | 2:6,328,543-6,329,940 | - | C1H2g30241 | C2H2g28607 | LOC_Os02g12790 | Os02g0220400 | CGA1, Cga1, OsCga1, OsCGA1, OsGATA11, GATA11 | Detail |
| CX2g019563 | 2:6,339,423-6,342,303 | + | C1H2g23503 | C2H2g14333 | LOC_Os02g12794 | Os02g0220500 | - | Detail |
| CX2g019782 | 2:6,345,290-6,348,718 | + | C1H2g00344 | C2H2g18250 | LOC_Os02g12800 | Os02g0220600 | - | Detail |
| CX2g024312 | 2:6,350,004-6,356,319 | - | C1H2g04441 | C2H2g03696 | LOC_Os02g12810 | Os02g0220700 | - | Detail |
| CX2g024912 | 2:6,365,988-6,371,045 | - | C1H2g21438 | C2H2g00523 | LOC_Os02g12820 | Os02g0221100 | - | Detail |
| CX2g022115 | 2:6,396,471-6,400,602 | + | C1H2g12870 | C2H2g11540 | LOC_Os02g12840 | Os02g0221300 | - | Detail |
| CX2g023110 | 2:6,411,602-6,414,755 | - | C1H2g13065 | C2H2g13827 | LOC_Os02g12850 | Os02g0221500 | - | Detail |
| CX2g021581 | 2:6,417,663-6,420,895 | + | C1H2g20786 | C2H2g10410 | LOC_Os02g12870 | Os02g0221600 | - | Detail |
| CX2g021336 | 2:6,424,388-6,427,588 | + | C1H2g10087 | C2H2g06088 | LOC_Os02g12880 | Os02g0221800 | - | Detail |
| CX2g021518 | 2:6,428,567-6,430,728 | - | C1H2g03914 | C2H2g18416 | LOC_Os02g12890 | Os02g0221900 | - | Detail |