| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g28698 | 9:1,487,240-1,496,362 | - | C1H9g29952 | CX9g056246 | LOC_Os09g03630 | Os09g0123500 | - | Detail |
| C2H9g19292 | 9:1,536,311-1,545,865 | - | C1H9g16072 | CX9g057791 | LOC_Os09g03680 | Os09g0124100 | - | Detail |
| C2H9g25534 | 9:1,560,865-1,562,022 | - | C1H9g23209 | - | - | - | - | Detail |
| C2H9g24306 | 9:1,565,222-1,568,002 | - | C1H9g23209 | - | - | - | - | Detail |
| C2H9g16378 | 9:1,569,834-1,579,280 | + | C1H9g12801 | CX9g056574 | LOC_Os09g03750 | Os09g0124800 | - | Detail |
| C2H9g09163 | 9:1,591,367-1,592,010 | - | C1H9g18385 | CX9g057875 | LOC_Os09g03780 | Os02g0135850 | - | Detail |
| C2H9g12670 | 9:1,606,662-1,607,297 | - | C1H9g04346 | CX9g057169 | LOC_Os09g03810 | Os09g0125400 | - | Detail |
| C2H9g17647 | 9:1,637,192-1,640,689 | + | C1H9g26448 | CX9g055235 | LOC_Os09g03890 | Os09g0125828 | TAPE | Detail |
| C2H9g28868 | 9:1,662,498-1,675,693 | - | C1H9g19601 | CX9g056929 | LOC_Os09g03939 | Os09g0125900 | - | Detail |
| C2H9g26990 | 9:1,716,065-1,716,805 | + | C1H9g10816 | CX9g056311 | LOC_Os09g03990 | Os09g0126600 | - | Detail |
| C2H9g15050 | 9:1,735,263-1,735,961 | + | C1H5g18816 | CX9g056105 | - | Os10g0408700 | - | Detail |
| C2H9g29380 | 9:1,736,488-1,737,407 | + | C1H9g06259 | CX9g055011 | - | - | - | Detail |
| C2H9g25301 | 9:1,740,826-1,742,474 | + | C1H9g22700 | - | - | - | - | Detail |
| C2H9g25521 | 9:1,746,832-1,750,373 | - | C1H9g15887 | CX9g054979 | LOC_Os09g04050 | Os09g0127300 | OsCCR17 | Detail |
| C2H9g06710 | 9:1,775,688-1,776,053 | - | - | CX9g057890 | LOC_Os09g04100 | Os09g0127700 | - | Detail |
| C2H9g09431 | 9:1,789,603-1,795,661 | - | C1H9g16571 | CX9g056004 | LOC_Os09g04110 | Os09g0127800 | - | Detail |
| C2H9g00209 | 9:1,823,495-1,829,332 | - | C1H9g16037 | CX9g057437 | LOC_Os09g04160 | Os09g0128400 | - | Detail |
| C2H9g03904 | 9:1,840,304-1,848,461 | - | C1H9g24985 | CX9g055087 | LOC_Os09g04210 | Os09g0128600 | - | Detail |
| C2H9g28638 | 9:1,856,095-1,857,048 | + | C1H9g09088 | CX9g056204 | LOC_Os09g04310 | Os09g0129500 | - | Detail |
| C2H9g26215 | 9:1,879,816-1,880,763 | - | C1H9g09088 | CX9g055776 | LOC_Os09g04339 | Os09g0129600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022269 | 2:6,037,082-6,037,633 | - | - | - | - | - | - | Detail |
| CX2g020234 | 2:6,038,596-6,039,033 | - | C1H2g31593 | - | LOC_Os02g12480 | Os02g0216300 | - | Detail |
| CX2g021162 | 2:6,055,380-6,055,533 | + | C1H8g06700 | C2H8g05846 | LOC_Os03g17084 | Os01g0149600 | H2B | Detail |
| CX2g024729 | 2:6,076,272-6,076,460 | - | - | - | - | - | - | Detail |
| CX2g019897 | 2:6,128,215-6,128,439 | + | - | - | - | - | - | Detail |
| CX2g019918 | 2:6,137,199-6,137,857 | - | C1H2g06960 | - | - | - | - | Detail |
| CX2g023330 | 2:6,140,365-6,140,841 | - | C1H2g31593 | C2H2g26935 | LOC_Os02g12480 | Os02g0216300 | - | Detail |
| CX2g022693 | 2:6,142,456-6,143,085 | - | - | - | - | - | - | Detail |
| CX2g023027 | 2:6,160,781-6,162,783 | + | C1H2g11667 | C2H2g02696 | LOC_Os02g12540 | Os02g0217400 | - | Detail |
| CX2g021453 | 2:6,164,334-6,166,315 | + | C1H2g21017 | C2H2g14429 | LOC_Os02g12550 | Os02g0217400 | - | Detail |
| CX2g021931 | 2:6,175,683-6,179,248 | + | C1H2g13963 | C2H2g29582 | LOC_Os02g12570 | Os02g0217500 | - | Detail |
| CX2g021895 | 2:6,180,236-6,184,166 | - | C1H2g08914 | C2H2g00474 | LOC_Os02g12580 | Os02g0217600 | OsPP2A-3 | Detail |
| CX2g020586 | 2:6,187,358-6,192,356 | + | C1H2g12784 | C2H2g14099 | LOC_Os02g12600 | Os02g0217800 | - | Detail |
| CX2g021986 | 2:6,192,681-6,193,205 | - | C1H2g08167 | C2H2g20685 | LOC_Os02g12610 | Os02g0217900 | - | Detail |
| CX2g023749 | 2:6,197,513-6,204,409 | + | C1H2g05762 | C2H2g24551 | LOC_Os02g12650 | Os02g0218200 | - | Detail |
| CX2g022045 | 2:6,208,874-6,212,878 | - | C1H2g24654 | C2H2g28852 | LOC_Os02g12660 | Os02g0218400 | - | Detail |
| CX2g024682 | 2:6,215,366-6,222,186 | + | C1H2g21561 | C2H2g19601 | LOC_Os02g12670 | Os02g0218600 | - | Detail |
| CX2g024749 | 2:6,227,457-6,228,959 | + | C1H2g18950 | - | LOC_Os02g12680 | Os02g0218700 | HPL2, AOS3, OsHPL2, OsAOS3 | Detail |
| CX2g024585 | 2:6,239,443-6,240,975 | + | C1H2g20313 | C2H2g08598 | LOC_Os02g12690 | Os02g0218800 | AOS4, HPL1, OsAOS4, CYP74A4, OsHPL1 | Detail |
| CX2g022637 | 2:6,245,860-6,247,269 | - | C1H2g05355 | C2H2g01092 | LOC_Os02g12700 | Os02g0219000 | - | Detail |