| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g09038 | 4:2,368,447-2,370,528 | - | C2H4g20001 | CX4g036649 | LOC_Os04g06900 | Os04g0152000 | - | Detail |
| C1H4g13377 | 4:2,368,468-2,369,124 | + | C2H4g19138 | - | - | - | - | Detail |
| C1H4g20470 | 4:2,369,690-2,370,555 | + | C2H4g24428 | CX4g033304 | - | Os04g0137550 | - | Detail |
| C1H4g26592 | 4:2,372,045-2,376,221 | - | C2H4g26531 | CX4g033840 | LOC_Os04g06850 | Os04g0152500 | - | Detail |
| C1H4g30768 | 4:2,462,482-2,465,658 | + | C2H4g06170 | CX4g036649 | LOC_Os04g06900 | Os04g0153000 | - | Detail |
| C1H4g02137 | 4:2,473,554-2,475,488 | + | C2H4g17942 | CX4g035962 | LOC_Os04g06840 | Os04g0152400 | - | Detail |
| C1H4g29986 | 4:2,505,361-2,506,881 | + | C2H4g06170 | CX4g036649 | LOC_Os04g06990 | Os04g0154000 | - | Detail |
| C1H4g03719 | 4:2,507,006-2,507,837 | + | - | - | LOC_Os04g06990 | Os04g0154000 | - | Detail |
| C1H4g30206 | 4:2,646,594-2,646,917 | + | - | CX4g035403 | LOC_Os01g64949 | Os01g0869750 | - | Detail |
| C1H4g27704 | 4:2,647,222-2,650,382 | - | C2H4g30305 | CX4g034065 | LOC_Os01g63380 | Os04g0127900 | - | Detail |
| C1H4g11471 | 4:2,709,370-2,714,460 | + | C2H4g24610 | CX4g034079 | LOC_Os04g07890 | Os04g0155200 | - | Detail |
| C1H4g30323 | 4:2,721,108-2,722,316 | + | C2H4g20575 | CX4g031884 | LOC_Os04g07920 | Os04g0161400 | - | Detail |
| C1H4g00067 | 4:2,724,345-2,725,017 | - | C2H4g00652 | CX4g033462 | LOC_Os04g07970 | - | - | Detail |
| C1H4g27809 | 4:2,729,942-2,732,320 | + | C2H4g21151 | CX4g033812 | LOC_Os04g09770 | Os04g0161850 | - | Detail |
| C1H4g16605 | 4:2,747,094-2,749,142 | + | C2H4g06170 | CX4g035506 | LOC_Os04g12110 | Os04g0156000 | - | Detail |
| C1H4g23976 | 4:2,752,825-2,754,993 | + | C2H4g17942 | CX4g034341 | LOC_Os04g08200 | Os04g0154800 | - | Detail |
| C1H4g14091 | 4:2,764,324-2,766,127 | + | C2H4g16966 | CX4g033942 | LOC_Os04g07830 | Os04g0155000 | - | Detail |
| C1H4g18551 | 4:2,768,475-2,772,969 | + | C2H4g24610 | CX4g034079 | LOC_Os04g07890 | Os04g0155200 | - | Detail |
| C1H4g01636 | 4:2,777,107-2,779,072 | - | C2H4g15311 | CX4g033052 | LOC_Os04g09740 | Os06g0521000 | - | Detail |
| C1H4g01540 | 4:2,922,543-2,925,377 | + | C2H4g06576 | CX4g034079 | LOC_Os04g07890 | Os04g0155200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022269 | 2:6,037,082-6,037,633 | - | - | - | - | - | - | Detail |
| CX2g020234 | 2:6,038,596-6,039,033 | - | C1H2g31593 | - | LOC_Os02g12480 | Os02g0216300 | - | Detail |
| CX2g021162 | 2:6,055,380-6,055,533 | + | C1H8g06700 | C2H8g05846 | LOC_Os03g17084 | Os01g0149600 | H2B | Detail |
| CX2g024729 | 2:6,076,272-6,076,460 | - | - | - | - | - | - | Detail |
| CX2g019897 | 2:6,128,215-6,128,439 | + | - | - | - | - | - | Detail |
| CX2g019918 | 2:6,137,199-6,137,857 | - | C1H2g06960 | - | - | - | - | Detail |
| CX2g023330 | 2:6,140,365-6,140,841 | - | C1H2g31593 | C2H2g26935 | LOC_Os02g12480 | Os02g0216300 | - | Detail |
| CX2g022693 | 2:6,142,456-6,143,085 | - | - | - | - | - | - | Detail |
| CX2g023027 | 2:6,160,781-6,162,783 | + | C1H2g11667 | C2H2g02696 | LOC_Os02g12540 | Os02g0217400 | - | Detail |
| CX2g021453 | 2:6,164,334-6,166,315 | + | C1H2g21017 | C2H2g14429 | LOC_Os02g12550 | Os02g0217400 | - | Detail |
| CX2g021931 | 2:6,175,683-6,179,248 | + | C1H2g13963 | C2H2g29582 | LOC_Os02g12570 | Os02g0217500 | - | Detail |
| CX2g021895 | 2:6,180,236-6,184,166 | - | C1H2g08914 | C2H2g00474 | LOC_Os02g12580 | Os02g0217600 | OsPP2A-3 | Detail |
| CX2g020586 | 2:6,187,358-6,192,356 | + | C1H2g12784 | C2H2g14099 | LOC_Os02g12600 | Os02g0217800 | - | Detail |
| CX2g021986 | 2:6,192,681-6,193,205 | - | C1H2g08167 | C2H2g20685 | LOC_Os02g12610 | Os02g0217900 | - | Detail |
| CX2g023749 | 2:6,197,513-6,204,409 | + | C1H2g05762 | C2H2g24551 | LOC_Os02g12650 | Os02g0218200 | - | Detail |
| CX2g022045 | 2:6,208,874-6,212,878 | - | C1H2g24654 | C2H2g28852 | LOC_Os02g12660 | Os02g0218400 | - | Detail |
| CX2g024682 | 2:6,215,366-6,222,186 | + | C1H2g21561 | C2H2g19601 | LOC_Os02g12670 | Os02g0218600 | - | Detail |
| CX2g024749 | 2:6,227,457-6,228,959 | + | C1H2g18950 | - | LOC_Os02g12680 | Os02g0218700 | HPL2, AOS3, OsHPL2, OsAOS3 | Detail |
| CX2g024585 | 2:6,239,443-6,240,975 | + | C1H2g20313 | C2H2g08598 | LOC_Os02g12690 | Os02g0218800 | AOS4, HPL1, OsAOS4, CYP74A4, OsHPL1 | Detail |
| CX2g022637 | 2:6,245,860-6,247,269 | - | C1H2g05355 | C2H2g01092 | LOC_Os02g12700 | Os02g0219000 | - | Detail |