| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g20827 | 11:1,880,549-1,880,986 | + | - | CX11g011072 | LOC_Os11g05170 | Os11g0149200 | - | Detail |
| C1H11g03572 | 11:1,882,937-1,883,529 | + | C2H11g10430 | CX11g011466 | LOC_Os11g05180 | Os11g0149300 | - | Detail |
| C1H11g21412 | 11:1,894,459-1,894,995 | + | C2H11g03500 | CX11g012236 | LOC_Os11g05190 | Os11g0149400 | - | Detail |
| C1H11g25603 | 11:1,905,520-1,907,046 | + | C2H11g02363 | CX11g014435 | LOC_Os11g05240 | Os11g0149900 | - | Detail |
| C1H11g03894 | 11:1,909,223-1,912,449 | + | C2H11g22001 | CX11g012865 | LOC_Os11g05260 | Os11g0150100 | - | Detail |
| C1H11g02675 | 11:1,918,212-1,918,979 | + | C2H11g05326 | - | - | Os11g0150200 | - | Detail |
| C1H11g28497 | 11:1,920,137-1,921,159 | + | C2H11g05326 | CX11g011287 | LOC_Os11g05280 | Os12g0149000 | - | Detail |
| C1H11g16763 | 11:1,924,212-1,925,059 | - | C2H11g13418 | CX11g012127 | LOC_Os11g05290 | Os11g0150400 | - | Detail |
| C1H11g06810 | 11:1,926,050-1,928,436 | - | C2H11g13788 | CX11g015012 | LOC_Os11g05300 | Os11g0150450 | - | Detail |
| C1H11g23530 | 11:1,936,494-1,941,354 | + | C2H11g06058 | CX11g012630 | LOC_Os11g05320 | Os11g0150700 | OsAGC21 | Detail |
| C1H11g18720 | 11:1,945,061-1,949,373 | - | C2H11g30294 | CX11g014605 | LOC_Os11g05340 | Os11g0151002 | OsIQM7 | Detail |
| C1H11g21389 | 11:1,951,941-1,952,693 | - | - | - | - | Os06g0248300 | - | Detail |
| C1H11g21139 | 11:1,957,839-1,959,103 | + | C2H11g15706 | CX11g013216 | LOC_Os11g05360 | - | - | Detail |
| C1H11g10773 | 11:1,961,573-1,962,034 | - | C2H1g01847 | CX11g014098 | LOC_Os11g05370 | Os11g0151300 | - | Detail |
| C1H11g08052 | 11:1,972,334-1,973,896 | - | C2H11g18072 | CX11g011592 | LOC_Os11g05380 | Os11g0151400 | CYP94C2a, OsCYP94C2a | Detail |
| C1H11g26524 | 11:1,997,763-2,001,174 | - | C2H11g23919 | CX11g014831 | LOC_Os11g05390 | Os11g0151500 | - | Detail |
| C1H11g02541 | 11:2,002,915-2,005,103 | - | C2H11g17842 | CX11g011180 | LOC_Os11g05394 | Os12g0256300 | - | Detail |
| C1H11g08544 | 11:2,005,889-2,006,894 | - | C2H11g03090 | CX11g011180 | - | Os11g0151600 | - | Detail |
| C1H11g26192 | 11:2,007,546-2,010,467 | - | C2H11g15601 | CX11g013038 | LOC_Os11g05400 | Os11g0151700 | OsPAP21b, PAP21B | Detail |
| C1H11g06966 | 11:2,014,841-2,019,151 | + | C2H11g19908 | CX11g010866 | LOC_Os11g05410 | Os11g0151800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022269 | 2:6,037,082-6,037,633 | - | - | - | - | - | - | Detail |
| CX2g020234 | 2:6,038,596-6,039,033 | - | C1H2g31593 | - | LOC_Os02g12480 | Os02g0216300 | - | Detail |
| CX2g021162 | 2:6,055,380-6,055,533 | + | C1H8g06700 | C2H8g05846 | LOC_Os03g17084 | Os01g0149600 | H2B | Detail |
| CX2g024729 | 2:6,076,272-6,076,460 | - | - | - | - | - | - | Detail |
| CX2g019897 | 2:6,128,215-6,128,439 | + | - | - | - | - | - | Detail |
| CX2g019918 | 2:6,137,199-6,137,857 | - | C1H2g06960 | - | - | - | - | Detail |
| CX2g023330 | 2:6,140,365-6,140,841 | - | C1H2g31593 | C2H2g26935 | LOC_Os02g12480 | Os02g0216300 | - | Detail |
| CX2g022693 | 2:6,142,456-6,143,085 | - | - | - | - | - | - | Detail |
| CX2g023027 | 2:6,160,781-6,162,783 | + | C1H2g11667 | C2H2g02696 | LOC_Os02g12540 | Os02g0217400 | - | Detail |
| CX2g021453 | 2:6,164,334-6,166,315 | + | C1H2g21017 | C2H2g14429 | LOC_Os02g12550 | Os02g0217400 | - | Detail |
| CX2g021931 | 2:6,175,683-6,179,248 | + | C1H2g13963 | C2H2g29582 | LOC_Os02g12570 | Os02g0217500 | - | Detail |
| CX2g021895 | 2:6,180,236-6,184,166 | - | C1H2g08914 | C2H2g00474 | LOC_Os02g12580 | Os02g0217600 | OsPP2A-3 | Detail |
| CX2g020586 | 2:6,187,358-6,192,356 | + | C1H2g12784 | C2H2g14099 | LOC_Os02g12600 | Os02g0217800 | - | Detail |
| CX2g021986 | 2:6,192,681-6,193,205 | - | C1H2g08167 | C2H2g20685 | LOC_Os02g12610 | Os02g0217900 | - | Detail |
| CX2g023749 | 2:6,197,513-6,204,409 | + | C1H2g05762 | C2H2g24551 | LOC_Os02g12650 | Os02g0218200 | - | Detail |
| CX2g022045 | 2:6,208,874-6,212,878 | - | C1H2g24654 | C2H2g28852 | LOC_Os02g12660 | Os02g0218400 | - | Detail |
| CX2g024682 | 2:6,215,366-6,222,186 | + | C1H2g21561 | C2H2g19601 | LOC_Os02g12670 | Os02g0218600 | - | Detail |
| CX2g024749 | 2:6,227,457-6,228,959 | + | C1H2g18950 | - | LOC_Os02g12680 | Os02g0218700 | HPL2, AOS3, OsHPL2, OsAOS3 | Detail |
| CX2g024585 | 2:6,239,443-6,240,975 | + | C1H2g20313 | C2H2g08598 | LOC_Os02g12690 | Os02g0218800 | AOS4, HPL1, OsAOS4, CYP74A4, OsHPL1 | Detail |
| CX2g022637 | 2:6,245,860-6,247,269 | - | C1H2g05355 | C2H2g01092 | LOC_Os02g12700 | Os02g0219000 | - | Detail |