| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g12548 | 4:29,870,782-29,873,701 | - | C2H4g22497 | CX4g036015 | LOC_Os04g57510 | Os04g0670600 | - | Detail |
| C1H4g28067 | 4:29,874,706-29,880,746 | + | C2H4g29038 | CX4g033656 | LOC_Os04g57520 | Os04g0670800 | - | Detail |
| C1H4g24932 | 4:29,889,703-29,891,698 | - | C2H4g16367 | CX4g035876 | LOC_Os04g57530 | Os04g0670900 | SH4, sh4, SH3, SH3/SH4 | Detail |
| C1H4g07972 | 4:29,895,898-29,897,966 | - | C2H4g09789 | CX4g035340 | LOC_Os04g57540 | Os04g0671100 | - | Detail |
| C1H4g22743 | 4:29,898,781-29,902,244 | - | C2H4g30313 | CX4g036253 | LOC_Os04g57550 | Os04g0671200 | - | Detail |
| C1H4g10516 | 4:29,903,190-29,907,373 | - | C2H4g09887 | CX4g034946 | LOC_Os04g57560 | Os04g0671300 | PAO5, OsPAO5, OsAO2, AO2 | Detail |
| C1H4g18642 | 4:29,914,984-29,917,878 | - | C2H4g11022 | CX4g034217 | LOC_Os04g57590 | Os04g0671700 | OsDJ-1C | Detail |
| C1H4g10863 | 4:29,919,853-29,923,225 | - | C2H4g26599 | CX4g034187 | LOC_Os04g57600 | Os04g0671800 | - | Detail |
| C1H4g29876 | 4:29,925,187-29,932,498 | - | C2H4g28020 | CX4g036532 | LOC_Os04g57610 | Os04g0671900 | - | Detail |
| C1H4g03758 | 4:29,946,857-29,949,895 | - | C2H4g22256 | CX4g032181 | LOC_Os04g57630 | Os04g0672100 | OsPSKR2 | Detail |
| C1H4g28972 | 4:29,961,894-29,967,859 | - | C2H4g16737 | CX4g031927 | LOC_Os04g57640 | Os04g0672200 | - | Detail |
| C1H4g18744 | 4:29,969,283-29,973,110 | - | C2H4g14699 | CX4g031948 | LOC_Os04g57650 | Os04g0672300 | - | Detail |
| C1H4g12099 | 4:29,979,174-29,981,416 | - | C2H4g22256 | CX4g032181 | LOC_Os04g57660 | Os04g0672600 | - | Detail |
| C1H4g02898 | 4:29,987,329-29,990,623 | + | C2H4g13935 | CX4g031387 | LOC_Os04g57680 | Os04g0672800 | - | Detail |
| C1H4g21333 | 4:29,991,614-29,994,014 | + | C2H4g25125 | CX4g034255 | LOC_Os04g57690 | Os04g0672900 | - | Detail |
| C1H4g29753 | 4:29,995,710-30,000,759 | - | C2H4g28032 | CX4g032895 | LOC_Os04g57700 | Os04g0673000 | - | Detail |
| C1H4g17441 | 4:30,023,341-30,023,957 | + | C2H4g17256 | CX4g036002 | LOC_Os04g57720 | Os04g0673300 | RR6, OsRR6, rr6, Rra6, OsRRA6 | Detail |
| C1H4g06545 | 4:30,030,545-30,034,430 | - | C2H4g16666 | CX4g033276 | LOC_Os04g57730 | Os04g0673400 | - | Detail |
| C1H4g12522 | 4:30,037,329-30,037,956 | - | C2H4g21541 | CX4g032931 | LOC_Os04g57750 | Os04g0673800 | - | Detail |
| C1H4g09977 | 4:30,039,911-30,040,867 | - | C2H4g03386 | - | LOC_Os04g57760 | Os04g0674000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022332 | 2:5,647,870-5,656,930 | - | C1H2g10719 | C2H2g30306 | LOC_Os02g11840 | Os02g0209000 | - | Detail |
| CX2g020232 | 2:5,664,171-5,664,320 | - | C1H2g23805 | - | LOC_Os02g11859 | Os02g0209300 | - | Detail |
| CX2g020989 | 2:5,666,549-5,667,097 | - | C1H2g17269 | - | LOC_Os02g11870 | Os02g0209400 | - | Detail |
| CX2g022885 | 2:5,668,339-5,668,512 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g021767 | 2:5,670,776-5,671,092 | - | C1H2g21598 | C2H2g14329 | LOC_Os02g11880 | Os02g0264800 | - | Detail |
| CX2g024347 | 2:5,672,944-5,674,398 | - | C1H2g08072 | C2H2g21557 | LOC_Os02g11890 | Os02g0209900 | - | Detail |
| CX2g019257 | 2:5,678,656-5,679,671 | - | C1H2g31533 | C2H2g27730 | LOC_Os02g13250 | - | - | Detail |
| CX2g019288 | 2:5,696,226-5,699,743 | + | C1H2g21521 | C2H2g11194 | LOC_Os02g11930 | Os02g0210700 | - | Detail |
| CX2g021475 | 2:5,700,935-5,705,558 | + | C1H2g12089 | C2H2g01783 | LOC_Os02g11940 | Os02g0210800 | - | Detail |
| CX2g022659 | 2:5,707,187-5,707,753 | + | C1H2g07700 | C2H2g15777 | LOC_Os02g11950 | Os02g0210900 | - | Detail |
| CX2g024455 | 2:5,708,772-5,716,814 | + | C1H2g11109 | C2H2g17792 | LOC_Os02g11960 | Os02g0211000 | - | Detail |
| CX2g019252 | 2:5,721,973-5,725,499 | - | C1H2g20193 | C2H2g07143 | LOC_Os02g11980 | Os02g0211200 | - | Detail |
| CX2g024936 | 2:5,742,317-5,745,858 | - | C1H2g20193 | C2H2g07143 | LOC_Os02g12010 | Os02g0211600 | - | Detail |
| CX2g021546 | 2:5,768,538-5,772,054 | - | C1H2g22254 | C2H2g20036 | LOC_Os02g12030 | Os02g0211800 | - | Detail |
| CX2g021423 | 2:5,777,731-5,779,758 | - | C1H2g15932 | C2H2g28701 | LOC_Os02g12040 | Os02g0211900 | - | Detail |
| CX2g018915 | 2:5,787,316-5,787,866 | - | C1H2g04370 | C2H2g04434 | LOC_Os02g12060 | Os02g0212100 | - | Detail |
| CX2g021165 | 2:5,835,575-5,835,742 | + | - | - | - | - | - | Detail |
| CX2g021707 | 2:5,839,399-5,839,785 | - | C1H2g15671 | C2H2g08799 | - | Os07g0631500 | - | Detail |
| CX2g022712 | 2:5,840,844-5,842,832 | + | C1H2g04594 | C2H2g03339 | LOC_Os02g12130 | Os02g0212900 | - | Detail |
| CX2g023767 | 2:5,853,980-5,858,690 | - | C1H2g05649 | C2H2g10808 | LOC_Os02g12180 | Os02g0213100 | - | Detail |