| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g18098 | 4:22,366,357-22,367,357 | + | C1H4g27983 | CX4g036341 | LOC_Os04g43710 | Os04g0517500 | - | Detail |
| C2H4g25250 | 4:22,371,472-22,373,949 | - | C1H4g02633 | CX4g031725 | LOC_Os04g43730 | Os04g0517700 | - | Detail |
| C2H4g17137 | 4:22,383,999-22,387,231 | - | C1H4g03662 | CX4g034141 | LOC_Os04g54890 | Os02g0517900 | - | Detail |
| C2H4g28659 | 4:22,395,708-22,396,055 | + | - | CX4g031509 | LOC_Os04g43740 | Os04g0517900 | - | Detail |
| C2H4g18845 | 4:22,398,118-22,401,716 | - | C1H4g21239 | CX4g032795 | LOC_Os04g43750 | Os04g0518000 | - | Detail |
| C2H4g17450 | 4:22,406,282-22,409,267 | - | C1H4g17678 | CX4g031424 | LOC_Os04g43760 | Os04g0518100 | - | Detail |
| C2H4g28869 | 4:22,415,229-22,417,846 | - | C1H4g22637 | CX4g031711 | LOC_Os04g43800 | Os04g0518400 | OsPAL6 | Detail |
| C2H4g10523 | 4:22,426,478-22,429,294 | - | C1H4g07857 | - | LOC_Os04g43824 | Os04g0518650 | - | Detail |
| C2H4g12982 | 4:22,438,115-22,441,881 | + | C1H4g21094 | CX4g035278 | LOC_Os04g43840 | Os04g0518800 | LABA1, LOGL6, OsLOGL6, An-2 | Detail |
| C2H4g03913 | 4:22,457,073-22,459,758 | + | C1H4g30028 | CX4g031681 | LOC_Os04g43910 | Os04g0519700 | ARF10, qSE4 | Detail |
| C2H4g13261 | 4:22,466,807-22,478,296 | - | C1H4g09015 | CX4g033896 | LOC_Os04g43916 | Os04g0519900 | - | Detail |
| C2H4g00328 | 4:22,479,350-22,483,931 | - | C1H4g07978 | CX4g033084 | LOC_Os04g43922 | Os04g0520000 | - | Detail |
| C2H4g21426 | 4:22,490,205-22,490,729 | - | - | CX4g032805 | LOC_Os04g43990 | Os04g0520700 | OsS40-13 | Detail |
| C2H4g11598 | 4:22,496,349-22,497,743 | + | C1H4g05728 | CX4g034414 | LOC_Os04g44030 | Os04g0520900 | - | Detail |
| C2H4g13133 | 4:22,504,372-22,506,431 | + | C1H4g29455 | CX4g032514 | LOC_Os04g44060 | Os04g0521100 | OsPIP2;3 | Detail |
| C2H4g21649 | 4:22,507,177-22,507,470 | - | C1H4g20974 | - | - | - | - | Detail |
| C2H4g30421 | 4:22,507,757-22,508,776 | - | C1H4g01962 | - | - | - | - | Detail |
| C2H4g17426 | 4:22,510,893-22,512,892 | + | C1H4g05956 | CX4g034857 | LOC_Os04g44070 | Os04g0521300 | - | Detail |
| C2H4g25112 | 4:22,513,844-22,516,546 | + | C1H4g04229 | CX4g032134 | LOC_Os04g44090 | Os04g0521600 | - | Detail |
| C2H4g09903 | 4:22,517,122-22,517,592 | + | - | CX4g032134 | LOC_Os04g44100 | Os04g0521700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022152 | 2:5,251,244-5,253,272 | + | C1H2g04540 | C2H2g13782 | LOC_Os02g10780 | Os02g0202200 | OsSPX2, SPX2 | Detail |
| CX2g020057 | 2:5,255,171-5,283,820 | - | C1H2g00291 | C2H2g29179 | LOC_Os02g10794 | Os02g0202300 | - | Detail |
| CX2g021980 | 2:5,288,724-5,290,493 | + | C1H2g24396 | C2H2g11742 | LOC_Os02g10800 | Os02g0202400 | BT1-1, OsBT1-1, OsEnS-29 | Detail |
| CX2g024114 | 2:5,291,306-5,293,004 | - | C1H2g08933 | C2H2g19152 | LOC_Os02g10810 | Os02g0202500 | - | Detail |
| CX2g019700 | 2:5,300,039-5,302,046 | - | C1H2g31316 | - | - | - | - | Detail |
| CX2g021583 | 2:5,304,944-5,307,819 | - | C1H2g01124 | C2H2g03245 | LOC_Os02g10820 | Os02g0202600 | - | Detail |
| CX2g023013 | 2:5,308,685-5,309,679 | + | - | - | - | - | - | Detail |
| CX2g022814 | 2:5,311,030-5,313,818 | - | C1H2g31302 | C2H2g06319 | LOC_Os02g10840 | Os02g0202800 | - | Detail |
| CX2g019052 | 2:5,315,533-5,323,000 | - | C1H2g29373 | C2H2g07043 | LOC_Os02g10850 | Os02g0202900 | - | Detail |
| CX2g020238 | 2:5,324,883-5,326,469 | - | - | - | - | - | - | Detail |
| CX2g020727 | 2:5,347,083-5,348,543 | + | C1H2g01017 | C2H2g26118 | LOC_Os02g10880 | Os02g0203300 | - | Detail |
| CX2g020524 | 2:5,356,393-5,359,901 | - | C1H2g24176 | C2H2g10759 | LOC_Os02g10900 | Os02g0203500 | RLS1 | Detail |
| CX2g021071 | 2:5,363,724-5,364,951 | - | C1H2g09288 | C2H2g18458 | LOC_Os02g10920 | Os02g0203700 | SRZ1 | Detail |
| CX2g019443 | 2:5,377,470-5,378,198 | - | C1H2g31487 | - | LOC_Os02g10940 | Os02g0204000 | - | Detail |
| CX2g020220 | 2:5,378,978-5,379,340 | + | - | - | - | Os02g0204201 | - | Detail |
| CX2g021033 | 2:5,380,088-5,386,796 | + | C1H2g01355 | C2H2g20592 | LOC_Os02g10970 | Os02g0204300 | - | Detail |
| CX2g020882 | 2:5,388,480-5,391,634 | + | C1H2g02729 | C2H2g16217 | LOC_Os02g10990 | Os02g0204400 | - | Detail |
| CX2g024407 | 2:5,395,550-5,397,053 | + | C1H2g29802 | C2H2g15057 | LOC_Os02g11000 | Os02g0204500 | - | Detail |
| CX2g022229 | 2:5,427,787-5,430,057 | - | C1H2g04626 | C2H2g26988 | LOC_Os02g11020 | Os02g0204700 | - | Detail |
| CX2g019164 | 2:5,470,868-5,473,147 | - | C1H2g15482 | C2H2g03770 | LOC_Os02g11030 | Os02g0205000 | - | Detail |