| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g30214 | 3:30,110,176-30,116,405 | - | C1H3g19040 | CX3g026973 | LOC_Os03g57790 | Os03g0791800 | OsRad6 | Detail |
| C2H3g19877 | 3:30,121,830-30,126,985 | + | C1H3g04638 | CX3g031118 | LOC_Os03g57840 | Os03g0792400 | - | Detail |
| C2H3g20217 | 3:30,128,648-30,129,112 | + | C1H3g06972 | CX3g026059 | LOC_Os03g57854 | Os03g0792500 | - | Detail |
| C2H3g15262 | 3:30,130,419-30,134,695 | + | C1H3g08271 | CX3g027727 | LOC_Os03g57854 | Os03g0792500 | - | Detail |
| C2H3g21443 | 3:30,135,504-30,138,487 | - | C1H3g10930 | CX3g028037 | LOC_Os03g57870 | Os03g0792600 | - | Detail |
| C2H3g25447 | 3:30,143,054-30,146,048 | + | C1H3g25888 | CX3g029236 | LOC_Os03g57880 | Os03g0792800 | OsBGL8 | Detail |
| C2H3g20733 | 3:30,146,755-30,149,386 | - | C1H3g03780 | CX3g030105 | LOC_Os03g57890 | Os03g0792900 | OsSAP6 | Detail |
| C2H3g04800 | 3:30,151,047-30,152,477 | + | C1H3g10181 | - | - | - | - | Detail |
| C2H3g05066 | 3:30,155,573-30,156,320 | - | C1H3g01153 | CX3g031111 | LOC_Os03g57920 | Os03g0793300 | - | Detail |
| C2H3g15687 | 3:30,160,289-30,167,343 | + | C1H3g25262 | CX3g027479 | LOC_Os03g57940 | Os03g0793500 | - | Detail |
| C2H3g19336 | 3:30,170,775-30,175,364 | + | C1H3g03977 | CX3g026412 | LOC_Os03g57950 | Os03g0793600 | - | Detail |
| C2H3g14270 | 3:30,180,531-30,181,182 | + | C1H3g20219 | - | - | - | - | Detail |
| C2H3g20071 | 3:30,181,635-30,183,958 | + | C1H3g10439 | CX3g031262 | LOC_Os03g57960 | Os03g0793700 | OsCDP3.10, qSP3 | Detail |
| C2H3g00562 | 3:30,184,607-30,185,242 | - | C1H3g28172 | CX3g031217 | LOC_Os03g57970 | Os03g0793800 | - | Detail |
| C2H3g09651 | 3:30,187,370-30,188,698 | - | C1H3g24095 | CX3g025005 | LOC_Os03g57980 | Os03g0793900 | - | Detail |
| C2H3g03743 | 3:30,189,217-30,190,209 | + | C1H3g11974 | CX3g031217 | LOC_Os03g57990 | Os03g0794000 | - | Detail |
| C2H3g03085 | 3:30,196,354-30,198,273 | + | C1H3g19227 | CX3g029981 | LOC_Os03g58010 | Os03g0794300 | - | Detail |
| C2H3g06823 | 3:30,199,431-30,202,849 | - | C1H3g26466 | CX3g025037 | LOC_Os03g58040 | Os03g0794500 | - | Detail |
| C2H3g22104 | 3:30,207,113-30,208,580 | - | C1H3g11189 | CX3g029860 | LOC_Os03g58050 | Os03g0794700 | - | Detail |
| C2H3g21984 | 3:30,211,358-30,222,171 | + | C1H3g18133 | CX3g027656 | LOC_Os03g58060 | Os03g0794800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001111 | 1:9,139,895-9,142,254 | - | C1H1g13588 | C2H1g07308 | LOC_Os01g18220 | Os01g0284900 | - | Detail |
| CX1g003253 | 1:9,154,218-9,155,017 | - | C1H1g17641 | C2H1g20440 | LOC_Os01g18230 | - | - | Detail |
| CX1g000625 | 1:9,155,562-9,155,729 | - | - | - | - | - | - | Detail |
| CX1g005501 | 1:9,157,145-9,157,489 | + | - | - | - | Os01g0285200 | - | Detail |
| CX1g006251 | 1:9,163,953-9,165,454 | - | C1H1g06479 | C2H1g10789 | LOC_Os01g18240 | Os01g0285300 | MYB61, OsMYB55/61, JMTF1 | Detail |
| CX1g003004 | 1:9,196,756-9,197,046 | + | - | - | - | - | - | Detail |
| CX1g001682 | 1:9,207,395-9,208,250 | - | - | - | - | - | - | Detail |
| CX1g000217 | 1:9,210,726-9,213,937 | + | C1H1g05697 | C2H1g03219 | LOC_Os01g18280 | Os01g0286000 | - | Detail |
| CX1g006989 | 1:9,219,733-9,223,064 | - | C1H1g18723 | C2H1g23388 | LOC_Os01g13460 | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| CX1g003303 | 1:9,236,156-9,236,380 | - | - | - | - | - | - | Detail |
| CX1g001405 | 1:9,238,010-9,239,081 | - | C1H1g02909 | C2H1g25947 | - | - | - | Detail |
| CX1g004036 | 1:9,243,723-9,246,982 | + | C1H1g02936 | C2H1g13264 | LOC_Os01g18320 | Os01g0286600 | OsPPO1 | Detail |
| CX1g000296 | 1:9,259,784-9,263,080 | + | C1H1g02001 | C2H1g18493 | LOC_Os01g18360 | Os01g0286900 | - | Detail |
| CX1g003580 | 1:9,282,703-9,282,876 | - | - | - | - | - | - | Detail |
| CX1g002314 | 1:9,285,356-9,285,691 | + | C1H1g26094 | C2H1g16973 | LOC_Os01g18375 | Os07g0635900 | OsLti6a | Detail |
| CX1g007034 | 1:9,287,998-9,289,577 | - | C1H1g26001 | C2H1g10428 | LOC_Os01g18400 | Os01g0287600 | - | Detail |
| CX1g003773 | 1:9,296,581-9,296,872 | - | - | - | - | - | - | Detail |
| CX1g005603 | 1:9,324,091-9,324,451 | - | C1H1g01375 | C2H1g21581 | LOC_Os01g18450 | Os01g0288200 | - | Detail |
| CX1g002404 | 1:9,330,685-9,330,861 | - | - | - | - | - | - | Detail |
| CX1g005164 | 1:9,338,954-9,339,346 | + | - | - | - | Os01g0288700 | - | Detail |