| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g07692 | 3:10,454,072-10,455,997 | + | C1H3g25962 | CX3g027267 | LOC_Os03g20790 | Os03g0324300 | - | Detail |
| C2H3g01747 | 3:10,466,684-10,469,905 | - | C1H3g16108 | CX3g029464 | LOC_Os03g20840 | Os03g0324600 | - | Detail |
| C2H3g25599 | 3:10,490,131-10,493,032 | + | C1H3g01814 | CX3g030289 | LOC_Os03g20850 | Os03g0324700 | - | Detail |
| C2H3g14832 | 3:10,493,902-10,497,569 | - | C1H3g29147 | CX3g027309 | LOC_Os03g20860 | Os03g0324800 | - | Detail |
| C2H3g29819 | 3:10,501,580-10,502,551 | + | C1H3g29984 | CX3g029219 | LOC_Os03g20870 | Os03g0324900 | - | Detail |
| C2H3g26179 | 3:10,504,126-10,506,738 | - | C1H3g28159 | CX3g029378 | LOC_Os03g20880 | Os03g0325000 | OsPK7 | Detail |
| C2H3g08884 | 3:10,507,884-10,508,251 | - | C1H3g15612 | - | - | - | - | Detail |
| C2H3g04463 | 3:10,513,587-10,517,847 | - | C1H3g03872 | - | - | Os03g0325400 | - | Detail |
| C2H3g02731 | 3:10,515,682-10,517,957 | + | C1H3g21381 | CX3g030486 | LOC_Os03g20900 | Os03g0325500 | - | Detail |
| C2H3g29011 | 3:10,518,289-10,518,729 | - | - | - | - | - | - | Detail |
| C2H3g21562 | 3:10,522,040-10,525,799 | - | C1H3g24486 | CX3g025637 | LOC_Os03g20910 | Os03g0325600 | WOX6 | Detail |
| C2H3g27706 | 3:10,546,682-10,548,147 | + | C1H3g07872 | CX3g025537 | LOC_Os03g20920 | Os03g0325900 | - | Detail |
| C2H3g11406 | 3:10,549,921-10,552,638 | + | C1H3g04731 | CX3g025537 | LOC_Os03g20940 | Os03g0325900 | - | Detail |
| C2H3g11786 | 3:10,554,945-10,559,206 | - | C1H3g02319 | CX3g030451 | LOC_Os03g20949 | Os03g0326000 | - | Detail |
| C2H3g16867 | 3:10,565,550-10,568,764 | - | C1H3g02400 | CX3g026910 | LOC_Os03g20970 | Os03g0326200 | - | Detail |
| C2H3g17602 | 3:10,575,008-10,579,455 | - | C1H3g09206 | CX3g030054 | LOC_Os03g20980 | Os03g0326300 | - | Detail |
| C2H3g24174 | 3:10,598,353-10,600,014 | - | C1H3g15600 | CX3g025827 | LOC_Os03g21000 | Os03g0326500 | - | Detail |
| C2H3g04323 | 3:10,603,204-10,610,410 | + | C1H3g21481 | CX3g029985 | LOC_Os03g08400 | - | - | Detail |
| C2H3g29428 | 3:10,611,390-10,615,698 | - | C1H3g09196 | CX3g025696 | LOC_Os03g21020 | Os03g0326600 | - | Detail |
| C2H3g08708 | 3:10,621,708-10,623,734 | - | C1H3g00133 | CX3g028720 | LOC_Os03g21030 | Os03g0327100 | OsNAC17 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001111 | 1:9,139,895-9,142,254 | - | C1H1g13588 | C2H1g07308 | LOC_Os01g18220 | Os01g0284900 | - | Detail |
| CX1g003253 | 1:9,154,218-9,155,017 | - | C1H1g17641 | C2H1g20440 | LOC_Os01g18230 | - | - | Detail |
| CX1g000625 | 1:9,155,562-9,155,729 | - | - | - | - | - | - | Detail |
| CX1g005501 | 1:9,157,145-9,157,489 | + | - | - | - | Os01g0285200 | - | Detail |
| CX1g006251 | 1:9,163,953-9,165,454 | - | C1H1g06479 | C2H1g10789 | LOC_Os01g18240 | Os01g0285300 | MYB61, OsMYB55/61, JMTF1 | Detail |
| CX1g003004 | 1:9,196,756-9,197,046 | + | - | - | - | - | - | Detail |
| CX1g001682 | 1:9,207,395-9,208,250 | - | - | - | - | - | - | Detail |
| CX1g000217 | 1:9,210,726-9,213,937 | + | C1H1g05697 | C2H1g03219 | LOC_Os01g18280 | Os01g0286000 | - | Detail |
| CX1g006989 | 1:9,219,733-9,223,064 | - | C1H1g18723 | C2H1g23388 | LOC_Os01g13460 | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| CX1g003303 | 1:9,236,156-9,236,380 | - | - | - | - | - | - | Detail |
| CX1g001405 | 1:9,238,010-9,239,081 | - | C1H1g02909 | C2H1g25947 | - | - | - | Detail |
| CX1g004036 | 1:9,243,723-9,246,982 | + | C1H1g02936 | C2H1g13264 | LOC_Os01g18320 | Os01g0286600 | OsPPO1 | Detail |
| CX1g000296 | 1:9,259,784-9,263,080 | + | C1H1g02001 | C2H1g18493 | LOC_Os01g18360 | Os01g0286900 | - | Detail |
| CX1g003580 | 1:9,282,703-9,282,876 | - | - | - | - | - | - | Detail |
| CX1g002314 | 1:9,285,356-9,285,691 | + | C1H1g26094 | C2H1g16973 | LOC_Os01g18375 | Os07g0635900 | OsLti6a | Detail |
| CX1g007034 | 1:9,287,998-9,289,577 | - | C1H1g26001 | C2H1g10428 | LOC_Os01g18400 | Os01g0287600 | - | Detail |
| CX1g003773 | 1:9,296,581-9,296,872 | - | - | - | - | - | - | Detail |
| CX1g005603 | 1:9,324,091-9,324,451 | - | C1H1g01375 | C2H1g21581 | LOC_Os01g18450 | Os01g0288200 | - | Detail |
| CX1g002404 | 1:9,330,685-9,330,861 | - | - | - | - | - | - | Detail |
| CX1g005164 | 1:9,338,954-9,339,346 | + | - | - | - | Os01g0288700 | - | Detail |