| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g25535 | 12:2,546,151-2,546,645 | + | C1H12g25513 | CX11g015002 | LOC_Os12g05980 | Os12g0156000 | OsS40-11 | Detail |
| C2H12g21191 | 12:2,560,559-2,561,640 | + | C1H12g22379 | CX12g018344 | LOC_Os12g06010 | - | - | Detail |
| C2H12g11114 | 12:2,567,938-2,571,346 | + | C1H12g25878 | CX12g018607 | LOC_Os12g06020 | Os12g0156400 | OsDCP1 | Detail |
| C2H12g15516 | 12:2,572,880-2,573,452 | - | C1H12g25918 | CX12g016643 | LOC_Os12g06030 | Os12g0156500 | - | Detail |
| C2H12g19712 | 12:2,576,303-2,576,581 | - | C1H12g17917 | CX12g016643 | LOC_Os12g06030 | Os12g0156500 | - | Detail |
| C2H12g03157 | 12:2,588,631-2,589,116 | - | C1H12g00007 | CX12g016293 | LOC_Os12g06050 | Os12g0106600 | - | Detail |
| C2H12g03761 | 12:2,599,531-2,606,072 | + | C1H12g29220 | CX12g017632 | LOC_Os12g06060 | Os12g0156866 | - | Detail |
| C2H12g18883 | 12:2,613,454-2,615,343 | + | C1H12g13279 | CX12g017739 | LOC_Os12g06070 | Os12g0156900 | - | Detail |
| C2H12g29667 | 12:2,619,177-2,620,415 | - | C1H12g26534 | CX12g018202 | LOC_Os12g06080 | Os12g0157000 | - | Detail |
| C2H12g07567 | 12:2,632,299-2,636,731 | - | C1H12g29304 | CX12g015097 | LOC_Os12g06100 | Os12g0157200 | - | Detail |
| C2H12g21615 | 12:2,654,243-2,654,611 | + | C1H12g00096 | CX12g017990 | LOC_Os12g06130 | Os12g0157700 | - | Detail |
| C2H12g13101 | 12:2,715,806-2,721,806 | + | C1H12g07813 | CX12g016240 | LOC_Os12g06180 | Os12g0158600 | - | Detail |
| C2H12g24008 | 12:2,727,903-2,732,539 | - | C1H12g04349 | CX12g018078 | LOC_Os12g06200 | Os12g0158800 | OsE2F2 | Detail |
| C2H12g08720 | 12:2,757,726-2,764,514 | - | C1H12g29219 | CX12g016442 | LOC_Os12g06270 | Os12g0159700 | - | Detail |
| C2H12g05778 | 12:2,767,340-2,767,753 | + | C1H12g10472 | CX12g017068 | LOC_Os12g06280 | Os12g0160100 | - | Detail |
| C2H12g08070 | 12:2,776,076-2,778,130 | - | C1H12g06122 | CX12g017561 | LOC_Os12g06290 | Os12g0160200 | - | Detail |
| C2H12g11683 | 12:2,781,588-2,784,401 | + | C1H12g12753 | - | LOC_Os12g06300 | Os12g0160300 | - | Detail |
| C2H12g29516 | 12:2,792,678-2,797,331 | + | C1H12g24945 | CX12g015109 | LOC_Os12g06330 | Os12g0160400 | - | Detail |
| C2H12g11453 | 12:2,797,949-2,802,649 | - | C1H12g19020 | CX12g017963 | LOC_Os12g06340 | Os12g0160500 | - | Detail |
| C2H12g07679 | 12:2,799,020-2,801,388 | + | C1H12g30816 | - | - | Os12g0160650 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001111 | 1:9,139,895-9,142,254 | - | C1H1g13588 | C2H1g07308 | LOC_Os01g18220 | Os01g0284900 | - | Detail |
| CX1g003253 | 1:9,154,218-9,155,017 | - | C1H1g17641 | C2H1g20440 | LOC_Os01g18230 | - | - | Detail |
| CX1g000625 | 1:9,155,562-9,155,729 | - | - | - | - | - | - | Detail |
| CX1g005501 | 1:9,157,145-9,157,489 | + | - | - | - | Os01g0285200 | - | Detail |
| CX1g006251 | 1:9,163,953-9,165,454 | - | C1H1g06479 | C2H1g10789 | LOC_Os01g18240 | Os01g0285300 | MYB61, OsMYB55/61, JMTF1 | Detail |
| CX1g003004 | 1:9,196,756-9,197,046 | + | - | - | - | - | - | Detail |
| CX1g001682 | 1:9,207,395-9,208,250 | - | - | - | - | - | - | Detail |
| CX1g000217 | 1:9,210,726-9,213,937 | + | C1H1g05697 | C2H1g03219 | LOC_Os01g18280 | Os01g0286000 | - | Detail |
| CX1g006989 | 1:9,219,733-9,223,064 | - | C1H1g18723 | C2H1g23388 | LOC_Os01g13460 | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| CX1g003303 | 1:9,236,156-9,236,380 | - | - | - | - | - | - | Detail |
| CX1g001405 | 1:9,238,010-9,239,081 | - | C1H1g02909 | C2H1g25947 | - | - | - | Detail |
| CX1g004036 | 1:9,243,723-9,246,982 | + | C1H1g02936 | C2H1g13264 | LOC_Os01g18320 | Os01g0286600 | OsPPO1 | Detail |
| CX1g000296 | 1:9,259,784-9,263,080 | + | C1H1g02001 | C2H1g18493 | LOC_Os01g18360 | Os01g0286900 | - | Detail |
| CX1g003580 | 1:9,282,703-9,282,876 | - | - | - | - | - | - | Detail |
| CX1g002314 | 1:9,285,356-9,285,691 | + | C1H1g26094 | C2H1g16973 | LOC_Os01g18375 | Os07g0635900 | OsLti6a | Detail |
| CX1g007034 | 1:9,287,998-9,289,577 | - | C1H1g26001 | C2H1g10428 | LOC_Os01g18400 | Os01g0287600 | - | Detail |
| CX1g003773 | 1:9,296,581-9,296,872 | - | - | - | - | - | - | Detail |
| CX1g005603 | 1:9,324,091-9,324,451 | - | C1H1g01375 | C2H1g21581 | LOC_Os01g18450 | Os01g0288200 | - | Detail |
| CX1g002404 | 1:9,330,685-9,330,861 | - | - | - | - | - | - | Detail |
| CX1g005164 | 1:9,338,954-9,339,346 | + | - | - | - | Os01g0288700 | - | Detail |