| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g05905 | 1:14,279,148-14,282,864 | - | C2H1g17384 | CX1g005864 | LOC_Os01g28030 | Os01g0378100 | - | Detail |
| C1H1g23587 | 1:14,350,923-14,352,035 | + | C2H1g17662 | CX1g002420 | LOC_Os01g28150 | Os01g0379400 | - | Detail |
| C1H1g16483 | 1:14,357,068-14,358,594 | - | - | CX1g001355 | - | Os01g0382900 | - | Detail |
| C1H1g15085 | 1:14,362,227-14,362,782 | - | C2H1g01732 | CX1g001355 | - | Os01g0647850 | - | Detail |
| C1H1g11971 | 1:14,366,824-14,367,117 | + | - | - | - | - | - | Detail |
| C1H1g07802 | 1:14,369,996-14,370,232 | + | C2H1g12044 | CX1g001385 | - | - | - | Detail |
| C1H1g14692 | 1:14,405,095-14,410,961 | - | C2H1g13733 | CX1g006593 | - | Os01g0646700 | - | Detail |
| C1H1g23029 | 1:14,485,343-14,489,446 | + | C2H1g10391 | CX1g000153 | LOC_Os01g28474 | Os01g0382200 | - | Detail |
| C1H1g18812 | 1:14,505,336-14,506,111 | - | C2H1g07235 | - | - | Os02g0438601 | - | Detail |
| C1H1g28798 | 1:14,523,274-14,528,900 | + | C2H1g24156 | CX1g004931 | LOC_Os01g28540 | Os01g0382700 | - | Detail |
| C1H1g04405 | 1:14,534,828-14,535,022 | - | C2H1g26525 | CX1g004147 | LOC_Os01g28600 | Os01g0383100 | - | Detail |
| C1H1g12341 | 1:14,535,103-14,537,172 | - | C2H1g27816 | CX1g004147 | LOC_Os01g28600 | Os01g0383100 | - | Detail |
| C1H1g04143 | 1:14,606,416-14,612,888 | + | C2H1g20117 | CX1g006936 | LOC_Os01g28680 | Os01g0383700 | - | Detail |
| C1H1g19835 | 1:14,630,456-14,638,544 | + | C2H1g23621 | CX1g000452 | LOC_Os01g28690 | Os01g0383900 | - | Detail |
| C1H1g08600 | 1:14,664,787-14,666,262 | - | C2H1g25702 | - | LOC_Os01g28744 | Os01g0384450 | - | Detail |
| C1H1g29747 | 1:14,710,710-14,712,534 | - | C2H1g13779 | - | LOC_Os01g28800 | - | - | Detail |
| C1H1g23642 | 1:14,713,461-14,718,968 | - | C2H1g16929 | CX1g004545 | LOC_Os01g28810 | Os01g0385000 | - | Detail |
| C1H1g03108 | 1:14,773,857-14,774,066 | - | C2H1g02219 | CX1g003054 | LOC_Os01g28840 | Os01g0385400 | - | Detail |
| C1H1g09217 | 1:14,774,127-14,776,025 | - | C2H1g02219 | CX1g004629 | LOC_Os01g28840 | Os01g0385400 | - | Detail |
| C1H1g24294 | 1:14,821,543-14,822,228 | + | C2H1g00425 | CX1g005528 | LOC_Os01g28980 | Os01g0386600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001111 | 1:9,139,895-9,142,254 | - | C1H1g13588 | C2H1g07308 | LOC_Os01g18220 | Os01g0284900 | - | Detail |
| CX1g003253 | 1:9,154,218-9,155,017 | - | C1H1g17641 | C2H1g20440 | LOC_Os01g18230 | - | - | Detail |
| CX1g000625 | 1:9,155,562-9,155,729 | - | - | - | - | - | - | Detail |
| CX1g005501 | 1:9,157,145-9,157,489 | + | - | - | - | Os01g0285200 | - | Detail |
| CX1g006251 | 1:9,163,953-9,165,454 | - | C1H1g06479 | C2H1g10789 | LOC_Os01g18240 | Os01g0285300 | MYB61, OsMYB55/61, JMTF1 | Detail |
| CX1g003004 | 1:9,196,756-9,197,046 | + | - | - | - | - | - | Detail |
| CX1g001682 | 1:9,207,395-9,208,250 | - | - | - | - | - | - | Detail |
| CX1g000217 | 1:9,210,726-9,213,937 | + | C1H1g05697 | C2H1g03219 | LOC_Os01g18280 | Os01g0286000 | - | Detail |
| CX1g006989 | 1:9,219,733-9,223,064 | - | C1H1g18723 | C2H1g23388 | LOC_Os01g13460 | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| CX1g003303 | 1:9,236,156-9,236,380 | - | - | - | - | - | - | Detail |
| CX1g001405 | 1:9,238,010-9,239,081 | - | C1H1g02909 | C2H1g25947 | - | - | - | Detail |
| CX1g004036 | 1:9,243,723-9,246,982 | + | C1H1g02936 | C2H1g13264 | LOC_Os01g18320 | Os01g0286600 | OsPPO1 | Detail |
| CX1g000296 | 1:9,259,784-9,263,080 | + | C1H1g02001 | C2H1g18493 | LOC_Os01g18360 | Os01g0286900 | - | Detail |
| CX1g003580 | 1:9,282,703-9,282,876 | - | - | - | - | - | - | Detail |
| CX1g002314 | 1:9,285,356-9,285,691 | + | C1H1g26094 | C2H1g16973 | LOC_Os01g18375 | Os07g0635900 | OsLti6a | Detail |
| CX1g007034 | 1:9,287,998-9,289,577 | - | C1H1g26001 | C2H1g10428 | LOC_Os01g18400 | Os01g0287600 | - | Detail |
| CX1g003773 | 1:9,296,581-9,296,872 | - | - | - | - | - | - | Detail |
| CX1g005603 | 1:9,324,091-9,324,451 | - | C1H1g01375 | C2H1g21581 | LOC_Os01g18450 | Os01g0288200 | - | Detail |
| CX1g002404 | 1:9,330,685-9,330,861 | - | - | - | - | - | - | Detail |
| CX1g005164 | 1:9,338,954-9,339,346 | + | - | - | - | Os01g0288700 | - | Detail |