| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g26114 | 6:1,370,954-1,375,564 | - | C2H6g22649 | CX6g045585 | LOC_Os06g04390 | Os06g0134900 | - | Detail |
| C1H6g13384 | 6:1,376,323-1,376,529 | - | - | - | - | - | - | Detail |
| C1H6g14899 | 6:1,377,126-1,377,551 | - | - | - | LOC_Os06g04420 | Os06g0135460 | - | Detail |
| C1H6g17670 | 6:1,383,919-1,388,265 | - | C2H6g20533 | CX6g044281 | LOC_Os06g04450 | Os06g0135900 | - | Detail |
| C1H6g26324 | 6:1,388,393-1,390,486 | - | C2H6g20533 | CX6g044281 | LOC_Os06g04450 | Os06g0135900 | - | Detail |
| C1H6g18799 | 6:1,391,285-1,394,599 | - | C2H6g29697 | CX6g041186 | LOC_Os06g04460 | Os06g0136000 | - | Detail |
| C1H6g16251 | 6:1,396,130-1,398,325 | - | C2H6g03212 | CX6g045091 | LOC_Os06g04470 | Os06g0136100 | - | Detail |
| C1H6g20742 | 6:1,402,181-1,402,758 | + | C2H6g27965 | CX6g042860 | LOC_Os06g04480 | Os06g0136300 | - | Detail |
| C1H6g01692 | 6:1,406,635-1,409,322 | + | C2H6g24780 | CX6g043687 | LOC_Os06g04500 | Os06g0136500 | - | Detail |
| C1H6g11836 | 6:1,410,153-1,415,440 | - | C2H6g14254 | CX6g043134 | LOC_Os06g04510 | Os06g0136600 | - | Detail |
| C1H6g12650 | 6:1,416,922-1,427,968 | + | C2H6g06858 | CX6g041242 | LOC_Os06g04520 | Os06g0136700 | - | Detail |
| C1H6g27183 | 6:1,428,593-1,431,514 | + | C2H6g29816 | CX6g041371 | LOC_Os06g04530 | Os06g0136800 | - | Detail |
| C1H6g03718 | 6:1,451,405-1,460,252 | - | C2H6g26508 | CX6g041492 | LOC_Os06g04560 | Os06g0137100 | - | Detail |
| C1H6g13843 | 6:1,456,879-1,457,141 | + | - | - | - | Os06g0137166 | - | Detail |
| C1H6g00708 | 6:1,465,236-1,468,187 | + | C2H6g14543 | CX6g043823 | LOC_Os06g04580 | Os06g0137300 | OsYAF9 | Detail |
| C1H6g23167 | 6:1,474,897-1,475,322 | + | C2H6g11377 | CX6g045942 | LOC_Os06g04590 | Os06g0137400 | - | Detail |
| C1H6g20269 | 6:1,477,326-1,478,309 | - | C2H6g14283 | - | - | - | - | Detail |
| C1H6g03688 | 6:1,478,396-1,483,718 | - | C2H6g05549 | CX6g043470 | LOC_Os06g04600 | Os06g0137500 | - | Detail |
| C1H6g19756 | 6:1,484,487-1,487,333 | + | C2H6g21165 | CX6g042032 | LOC_Os06g04610 | Os06g0137600 | - | Detail |
| C1H6g26864 | 6:1,492,096-1,493,223 | + | C2H6g25322 | CX6g045659 | LOC_Os06g04620 | Os06g0137700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001111 | 1:9,139,895-9,142,254 | - | C1H1g13588 | C2H1g07308 | LOC_Os01g18220 | Os01g0284900 | - | Detail |
| CX1g003253 | 1:9,154,218-9,155,017 | - | C1H1g17641 | C2H1g20440 | LOC_Os01g18230 | - | - | Detail |
| CX1g000625 | 1:9,155,562-9,155,729 | - | - | - | - | - | - | Detail |
| CX1g005501 | 1:9,157,145-9,157,489 | + | - | - | - | Os01g0285200 | - | Detail |
| CX1g006251 | 1:9,163,953-9,165,454 | - | C1H1g06479 | C2H1g10789 | LOC_Os01g18240 | Os01g0285300 | MYB61, OsMYB55/61, JMTF1 | Detail |
| CX1g003004 | 1:9,196,756-9,197,046 | + | - | - | - | - | - | Detail |
| CX1g001682 | 1:9,207,395-9,208,250 | - | - | - | - | - | - | Detail |
| CX1g000217 | 1:9,210,726-9,213,937 | + | C1H1g05697 | C2H1g03219 | LOC_Os01g18280 | Os01g0286000 | - | Detail |
| CX1g006989 | 1:9,219,733-9,223,064 | - | C1H1g18723 | C2H1g23388 | LOC_Os01g13460 | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| CX1g003303 | 1:9,236,156-9,236,380 | - | - | - | - | - | - | Detail |
| CX1g001405 | 1:9,238,010-9,239,081 | - | C1H1g02909 | C2H1g25947 | - | - | - | Detail |
| CX1g004036 | 1:9,243,723-9,246,982 | + | C1H1g02936 | C2H1g13264 | LOC_Os01g18320 | Os01g0286600 | OsPPO1 | Detail |
| CX1g000296 | 1:9,259,784-9,263,080 | + | C1H1g02001 | C2H1g18493 | LOC_Os01g18360 | Os01g0286900 | - | Detail |
| CX1g003580 | 1:9,282,703-9,282,876 | - | - | - | - | - | - | Detail |
| CX1g002314 | 1:9,285,356-9,285,691 | + | C1H1g26094 | C2H1g16973 | LOC_Os01g18375 | Os07g0635900 | OsLti6a | Detail |
| CX1g007034 | 1:9,287,998-9,289,577 | - | C1H1g26001 | C2H1g10428 | LOC_Os01g18400 | Os01g0287600 | - | Detail |
| CX1g003773 | 1:9,296,581-9,296,872 | - | - | - | - | - | - | Detail |
| CX1g005603 | 1:9,324,091-9,324,451 | - | C1H1g01375 | C2H1g21581 | LOC_Os01g18450 | Os01g0288200 | - | Detail |
| CX1g002404 | 1:9,330,685-9,330,861 | - | - | - | - | - | - | Detail |
| CX1g005164 | 1:9,338,954-9,339,346 | + | - | - | - | Os01g0288700 | - | Detail |