| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g01132 | 4:25,650,192-25,650,440 | + | C1H4g03657 | CX4g035450 | LOC_Os04g49954 | Os04g0589500 | - | Detail |
| C2H4g25942 | 4:25,651,004-25,653,966 | + | C1H4g04000 | CX4g036452 | LOC_Os04g49960 | Os04g0589600 | - | Detail |
| C2H4g07828 | 4:25,657,268-25,658,527 | + | C1H4g01937 | CX4g033285 | LOC_Os04g49970 | Os04g0589700 | - | Detail |
| C2H4g04763 | 4:25,659,868-25,660,245 | + | - | CX4g031536 | LOC_Os04g49980 | Os04g0589800 | - | Detail |
| C2H4g14617 | 4:25,662,162-25,666,185 | - | C1H4g23513 | CX4g033266 | LOC_Os04g49990 | Os04g0589900 | - | Detail |
| C2H4g17217 | 4:25,668,613-25,669,823 | + | C1H4g02193 | CX4g035591 | LOC_Os04g50020 | Os04g0590100 | - | Detail |
| C2H4g06669 | 4:25,672,460-25,673,377 | - | C1H4g12302 | CX4g036439 | LOC_Os04g50030 | Os04g0590200 | OsAHL9 | Detail |
| C2H4g09729 | 4:25,688,971-25,690,329 | - | C1H4g13780 | - | - | - | - | Detail |
| C2H4g13547 | 4:25,692,693-25,695,012 | + | C1H4g18122 | CX4g033121 | LOC_Os04g50060 | Os04g0590400 | OsGRAS23, GRAS23 | Detail |
| C2H4g26547 | 4:25,710,259-25,714,577 | + | C1H4g31900 | CX4g035797 | LOC_Os04g50090 | Os04g0590800 | - | Detail |
| C2H4g13442 | 4:25,717,262-25,718,413 | - | C1H4g23703 | CX4g032886 | LOC_Os04g50100 | Os04g0590900 | - | Detail |
| C2H4g02078 | 4:25,721,680-25,724,817 | - | C1H4g21960 | CX4g033322 | LOC_Os04g50110 | Os04g0591000 | - | Detail |
| C2H4g13975 | 4:25,734,463-25,735,787 | - | C1H4g24153 | CX4g034842 | LOC_Os04g50120 | Os04g0591100 | - | Detail |
| C2H4g25291 | 4:25,744,754-25,745,293 | + | - | CX4g032856 | LOC_Os04g50176 | Os04g0591300 | - | Detail |
| C2H4g07571 | 4:25,758,251-25,759,780 | - | C1H4g23201 | CX4g034407 | LOC_Os04g50200 | Os04g0591900 | - | Detail |
| C2H4g02751 | 4:25,765,114-25,768,209 | + | C1H4g20135 | CX4g033568 | LOC_Os04g50204 | Os04g0592400 | - | Detail |
| C2H4g26050 | 4:25,769,660-25,773,036 | - | C1H4g07229 | CX4g034823 | LOC_Os04g50208 | Os04g0592500 | - | Detail |
| C2H4g14985 | 4:25,773,909-25,776,482 | - | C1H4g17911 | CX4g036584 | LOC_Os04g50216 | Os04g0592600 | - | Detail |
| C2H4g11940 | 4:25,780,460-25,786,739 | - | C1H4g26639 | CX4g032082 | LOC_Os04g50660 | Os04g0592700 | - | Detail |
| C2H4g11781 | 4:25,790,673-25,791,994 | - | C1H4g07059 | CX4g035171 | LOC_Os04g50680 | Os04g0593200 | Os2R_MYB50 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022610 | 2:5,094,685-5,096,217 | + | C1H2g29768 | C2H2g10818 | LOC_Os02g10550 | Os02g0199200 | - | Detail |
| CX2g020000 | 2:5,105,128-5,106,675 | + | C1H2g29768 | C2H2g10818 | LOC_Os02g10580 | Os02g0199200 | - | Detail |
| CX2g023351 | 2:5,107,221-5,108,955 | - | C1H2g24423 | C2H2g11987 | LOC_Os02g10590 | Os02g0199300 | - | Detail |
| CX2g022696 | 2:5,114,417-5,115,727 | + | C1H2g30492 | C2H2g02789 | LOC_Os02g10600 | Os02g0199500 | - | Detail |
| CX2g024334 | 2:5,116,299-5,117,600 | - | C1H2g18635 | C2H2g20503 | - | Os02g0199600 | - | Detail |
| CX2g019312 | 2:5,130,116-5,135,786 | - | C1H2g14720 | C2H2g05452 | LOC_Os02g10630 | Os02g0199800 | - | Detail |
| CX2g022777 | 2:5,138,006-5,142,957 | - | C1H2g22079 | C2H2g30668 | LOC_Os02g10640 | Os02g0199900 | - | Detail |
| CX2g019933 | 2:5,147,793-5,152,063 | + | C1H2g00290 | C2H2g20119 | LOC_Os02g10650 | Os02g0200000 | OsSec14-7 | Detail |
| CX2g023120 | 2:5,152,728-5,152,994 | - | C1H2g01509 | - | - | - | - | Detail |
| CX2g020248 | 2:5,155,060-5,157,042 | - | C1H2g01509 | C2H2g08800 | LOC_Os02g10660 | Os02g0200300 | - | Detail |
| CX2g024181 | 2:5,162,298-5,165,145 | + | C1H2g22046 | C2H2g20788 | LOC_Os02g10690 | Os02g0200800 | - | Detail |
| CX2g023893 | 2:5,167,278-5,169,352 | - | C1H2g10608 | C2H2g24738 | LOC_Os02g10700 | Os02g0200900 | - | Detail |
| CX2g020260 | 2:5,177,321-5,177,473 | - | - | - | - | Os02g0630650 | - | Detail |
| CX2g018996 | 2:5,180,145-5,181,361 | - | C1H2g13038 | C2H2g10447 | LOC_Os02g10710 | Os02g0758000 | - | Detail |
| CX2g021219 | 2:5,181,996-5,185,731 | - | C1H2g25618 | C2H2g27059 | LOC_Os02g10720 | Os02g0201000 | - | Detail |
| CX2g019330 | 2:5,200,168-5,200,698 | - | C1H2g23514 | C2H2g02539 | LOC_Os02g10730 | Os02g0201300 | - | Detail |
| CX2g021817 | 2:5,209,192-5,209,644 | - | - | - | - | - | - | Detail |
| CX2g020008 | 2:5,216,295-5,219,506 | - | C1H2g23712 | C2H2g22913 | LOC_Os02g10740 | Os02g0201500 | - | Detail |
| CX2g021409 | 2:5,234,604-5,235,331 | + | C1H2g24067 | C2H2g21450 | LOC_Os02g10760 | Os02g0202000 | ERF3, Os02ERF, OsSHN1, OsWR1, WR1, OsERF#003, OsERF003, OsERF3, AP2/EREBP#012, AP2/EREBP12 | Detail |
| CX2g019796 | 2:5,240,540-5,242,820 | - | C1H2g20496 | C2H2g30620 | LOC_Os02g10770 | Os02g0201900 | - | Detail |