| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g12076 | 3:25,756,000-25,758,037 | + | C1H3g07329 | CX3g025970 | LOC_Os03g49450 | Os03g0701300 | - | Detail |
| C2H3g02417 | 3:25,759,525-25,761,882 | + | C1H3g07329 | CX3g026197 | LOC_Os03g49464 | Os03g0701400 | - | Detail |
| C2H3g02951 | 3:25,764,459-25,765,572 | + | C1H3g30968 | CX3g026197 | - | - | - | Detail |
| C2H3g12750 | 3:25,773,588-25,775,986 | - | C1H3g23591 | CX3g027768 | LOC_Os03g49490 | Os03g0701600 | - | Detail |
| C2H3g06305 | 3:25,777,901-25,782,322 | - | C1H3g03877 | CX3g028834 | LOC_Os03g49500 | Os03g0701700 | - | Detail |
| C2H3g14249 | 3:25,787,836-25,794,330 | + | C1H3g05492 | CX3g030270 | LOC_Os03g49510 | Os03g0701800 | - | Detail |
| C2H3g17325 | 3:25,794,481-25,798,522 | - | C1H3g29237 | CX3g025317 | LOC_Os03g49520 | Os03g0701900 | - | Detail |
| C2H3g13892 | 3:25,808,187-25,809,661 | - | C1H3g26019 | CX3g029512 | LOC_Os03g49524 | Os03g0702000 | - | Detail |
| C2H3g03163 | 3:25,814,227-25,815,645 | + | C1H3g02000 | CX3g030273 | LOC_Os03g49550 | Os03g0702500 | - | Detail |
| C2H3g18085 | 3:25,833,328-25,838,086 | + | C1H3g01842 | CX3g029283 | LOC_Os03g49570 | Os03g0702700 | - | Detail |
| C2H3g29993 | 3:25,843,604-25,844,257 | - | C1H3g13716 | CX3g025714 | LOC_Os03g49590 | Os03g0702900 | - | Detail |
| C2H3g11714 | 3:25,844,556-25,849,098 | - | C1H3g15421 | CX3g027255 | LOC_Os03g49600 | Os03g0703000 | - | Detail |
| C2H3g22582 | 3:25,851,998-25,857,278 | - | C1H3g29071 | CX3g027190 | LOC_Os03g49610 | Os03g0703100 | - | Detail |
| C2H3g04815 | 3:25,857,718-25,863,088 | - | C1H3g29286 | CX3g028984 | LOC_Os03g49620 | Os03g0703200 | TMS10L | Detail |
| C2H3g29194 | 3:25,863,993-25,870,294 | - | C1H3g20716 | CX3g026534 | LOC_Os03g49630 | Os03g0703300 | - | Detail |
| C2H3g01101 | 3:25,872,696-25,878,901 | - | C1H3g05428 | CX3g027729 | LOC_Os03g49640 | Os03g0703400 | OsCSL1, MKKK22 | Detail |
| C2H3g22172 | 3:25,885,794-25,886,414 | + | C1H3g02932 | CX3g031175 | - | Os03g0703600 | - | Detail |
| C2H3g01738 | 3:25,889,627-25,890,489 | - | - | CX3g024968 | LOC_Os03g49680 | - | - | Detail |
| C2H3g29973 | 3:25,894,402-25,897,031 | + | C1H3g27763 | CX3g028108 | LOC_Os03g49700 | Os03g0703900 | - | Detail |
| C2H3g13190 | 3:25,898,221-25,899,845 | + | C1H3g27362 | CX3g026571 | LOC_Os03g49710 | Os03g0704000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022610 | 2:5,094,685-5,096,217 | + | C1H2g29768 | C2H2g10818 | LOC_Os02g10550 | Os02g0199200 | - | Detail |
| CX2g020000 | 2:5,105,128-5,106,675 | + | C1H2g29768 | C2H2g10818 | LOC_Os02g10580 | Os02g0199200 | - | Detail |
| CX2g023351 | 2:5,107,221-5,108,955 | - | C1H2g24423 | C2H2g11987 | LOC_Os02g10590 | Os02g0199300 | - | Detail |
| CX2g022696 | 2:5,114,417-5,115,727 | + | C1H2g30492 | C2H2g02789 | LOC_Os02g10600 | Os02g0199500 | - | Detail |
| CX2g024334 | 2:5,116,299-5,117,600 | - | C1H2g18635 | C2H2g20503 | - | Os02g0199600 | - | Detail |
| CX2g019312 | 2:5,130,116-5,135,786 | - | C1H2g14720 | C2H2g05452 | LOC_Os02g10630 | Os02g0199800 | - | Detail |
| CX2g022777 | 2:5,138,006-5,142,957 | - | C1H2g22079 | C2H2g30668 | LOC_Os02g10640 | Os02g0199900 | - | Detail |
| CX2g019933 | 2:5,147,793-5,152,063 | + | C1H2g00290 | C2H2g20119 | LOC_Os02g10650 | Os02g0200000 | OsSec14-7 | Detail |
| CX2g023120 | 2:5,152,728-5,152,994 | - | C1H2g01509 | - | - | - | - | Detail |
| CX2g020248 | 2:5,155,060-5,157,042 | - | C1H2g01509 | C2H2g08800 | LOC_Os02g10660 | Os02g0200300 | - | Detail |
| CX2g024181 | 2:5,162,298-5,165,145 | + | C1H2g22046 | C2H2g20788 | LOC_Os02g10690 | Os02g0200800 | - | Detail |
| CX2g023893 | 2:5,167,278-5,169,352 | - | C1H2g10608 | C2H2g24738 | LOC_Os02g10700 | Os02g0200900 | - | Detail |
| CX2g020260 | 2:5,177,321-5,177,473 | - | - | - | - | Os02g0630650 | - | Detail |
| CX2g018996 | 2:5,180,145-5,181,361 | - | C1H2g13038 | C2H2g10447 | LOC_Os02g10710 | Os02g0758000 | - | Detail |
| CX2g021219 | 2:5,181,996-5,185,731 | - | C1H2g25618 | C2H2g27059 | LOC_Os02g10720 | Os02g0201000 | - | Detail |
| CX2g019330 | 2:5,200,168-5,200,698 | - | C1H2g23514 | C2H2g02539 | LOC_Os02g10730 | Os02g0201300 | - | Detail |
| CX2g021817 | 2:5,209,192-5,209,644 | - | - | - | - | - | - | Detail |
| CX2g020008 | 2:5,216,295-5,219,506 | - | C1H2g23712 | C2H2g22913 | LOC_Os02g10740 | Os02g0201500 | - | Detail |
| CX2g021409 | 2:5,234,604-5,235,331 | + | C1H2g24067 | C2H2g21450 | LOC_Os02g10760 | Os02g0202000 | ERF3, Os02ERF, OsSHN1, OsWR1, WR1, OsERF#003, OsERF003, OsERF3, AP2/EREBP#012, AP2/EREBP12 | Detail |
| CX2g019796 | 2:5,240,540-5,242,820 | - | C1H2g20496 | C2H2g30620 | LOC_Os02g10770 | Os02g0201900 | - | Detail |