| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g20692 | 2:3,060,464-3,065,717 | - | C1H2g17118 | CX2g021601 | LOC_Os02g06920 | Os02g0165000 | - | Detail |
| C2H2g16079 | 2:3,069,988-3,072,529 | + | C1H2g01650 | CX2g019152 | LOC_Os02g06930 | Os02g0165100 | - | Detail |
| C2H2g27607 | 2:3,155,405-3,158,804 | + | C1H2g23632 | CX2g024294 | LOC_Os02g07040 | Os02g0167000 | - | Detail |
| C2H2g29468 | 2:3,159,767-3,162,381 | + | C1H2g16723 | CX2g019411 | LOC_Os02g07044 | Os02g0167100 | - | Detail |
| C2H2g18240 | 2:3,168,991-3,171,917 | + | C1H2g27502 | CX2g022042 | LOC_Os02g07060 | Os02g0167300 | - | Detail |
| C2H2g24332 | 2:3,172,966-3,180,822 | - | C1H2g31793 | CX2g021350 | LOC_Os02g07070 | Os02g0167500 | LowAC1 | Detail |
| C2H2g21001 | 2:3,202,475-3,202,852 | + | C1H2g24765 | CX2g022899 | LOC_Os02g07110 | Os02g0445100 | - | Detail |
| C2H2g11696 | 2:3,206,702-3,216,701 | - | C1H2g25293 | CX2g021417 | LOC_Os02g07120 | Os02g0167700 | OsCAND1 | Detail |
| C2H2g19465 | 2:3,223,262-3,225,187 | - | C1H2g15991 | CX2g019496 | LOC_Os02g07160 | Os02g0168100 | OsHPPD | Detail |
| C2H2g21644 | 2:3,230,343-3,231,965 | - | C1H2g12427 | CX2g021826 | LOC_Os02g07170 | Os02g0168200 | - | Detail |
| C2H2g14957 | 2:3,235,166-3,238,330 | + | C1H2g27005 | CX2g022739 | LOC_Os02g07180 | Os02g0168300 | - | Detail |
| C2H2g15308 | 2:3,242,519-3,247,680 | + | C1H2g17697 | CX2g023861 | LOC_Os02g07190 | Os02g0168400 | - | Detail |
| C2H2g27598 | 2:3,249,548-3,251,603 | + | C1H2g15097 | CX2g019993 | LOC_Os02g07200 | Os02g0168500 | - | Detail |
| C2H2g30613 | 2:3,252,757-3,255,389 | - | C1H2g02992 | CX2g020274 | LOC_Os02g07210 | Os02g0168600 | - | Detail |
| C2H2g22535 | 2:3,259,890-3,261,785 | - | C1H2g24249 | CX2g022989 | LOC_Os02g07220 | Os02g0168700 | - | Detail |
| C2H2g29143 | 2:3,263,601-3,266,496 | + | C1H2g16743 | CX2g019641 | LOC_Os02g07230 | Os02g0168800 | - | Detail |
| C2H2g05298 | 2:3,267,042-3,268,348 | - | C1H2g05199 | CX2g023253 | LOC_Os02g07240 | Os02g0168900 | - | Detail |
| C2H2g28592 | 2:3,269,187-3,272,882 | - | C1H2g08763 | CX2g023357 | LOC_Os02g07250 | Os02g0169000 | - | Detail |
| C2H2g19444 | 2:3,276,297-3,280,134 | + | C1H2g16238 | CX2g020247 | LOC_Os02g07260 | Os02g0169300 | - | Detail |
| C2H2g02121 | 2:3,287,961-3,294,924 | - | C1H2g08697 | CX2g023065 | LOC_Os02g07310 | Os02g0169400 | OsAGO17 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022610 | 2:5,094,685-5,096,217 | + | C1H2g29768 | C2H2g10818 | LOC_Os02g10550 | Os02g0199200 | - | Detail |
| CX2g020000 | 2:5,105,128-5,106,675 | + | C1H2g29768 | C2H2g10818 | LOC_Os02g10580 | Os02g0199200 | - | Detail |
| CX2g023351 | 2:5,107,221-5,108,955 | - | C1H2g24423 | C2H2g11987 | LOC_Os02g10590 | Os02g0199300 | - | Detail |
| CX2g022696 | 2:5,114,417-5,115,727 | + | C1H2g30492 | C2H2g02789 | LOC_Os02g10600 | Os02g0199500 | - | Detail |
| CX2g024334 | 2:5,116,299-5,117,600 | - | C1H2g18635 | C2H2g20503 | - | Os02g0199600 | - | Detail |
| CX2g019312 | 2:5,130,116-5,135,786 | - | C1H2g14720 | C2H2g05452 | LOC_Os02g10630 | Os02g0199800 | - | Detail |
| CX2g022777 | 2:5,138,006-5,142,957 | - | C1H2g22079 | C2H2g30668 | LOC_Os02g10640 | Os02g0199900 | - | Detail |
| CX2g019933 | 2:5,147,793-5,152,063 | + | C1H2g00290 | C2H2g20119 | LOC_Os02g10650 | Os02g0200000 | OsSec14-7 | Detail |
| CX2g023120 | 2:5,152,728-5,152,994 | - | C1H2g01509 | - | - | - | - | Detail |
| CX2g020248 | 2:5,155,060-5,157,042 | - | C1H2g01509 | C2H2g08800 | LOC_Os02g10660 | Os02g0200300 | - | Detail |
| CX2g024181 | 2:5,162,298-5,165,145 | + | C1H2g22046 | C2H2g20788 | LOC_Os02g10690 | Os02g0200800 | - | Detail |
| CX2g023893 | 2:5,167,278-5,169,352 | - | C1H2g10608 | C2H2g24738 | LOC_Os02g10700 | Os02g0200900 | - | Detail |
| CX2g020260 | 2:5,177,321-5,177,473 | - | - | - | - | Os02g0630650 | - | Detail |
| CX2g018996 | 2:5,180,145-5,181,361 | - | C1H2g13038 | C2H2g10447 | LOC_Os02g10710 | Os02g0758000 | - | Detail |
| CX2g021219 | 2:5,181,996-5,185,731 | - | C1H2g25618 | C2H2g27059 | LOC_Os02g10720 | Os02g0201000 | - | Detail |
| CX2g019330 | 2:5,200,168-5,200,698 | - | C1H2g23514 | C2H2g02539 | LOC_Os02g10730 | Os02g0201300 | - | Detail |
| CX2g021817 | 2:5,209,192-5,209,644 | - | - | - | - | - | - | Detail |
| CX2g020008 | 2:5,216,295-5,219,506 | - | C1H2g23712 | C2H2g22913 | LOC_Os02g10740 | Os02g0201500 | - | Detail |
| CX2g021409 | 2:5,234,604-5,235,331 | + | C1H2g24067 | C2H2g21450 | LOC_Os02g10760 | Os02g0202000 | ERF3, Os02ERF, OsSHN1, OsWR1, WR1, OsERF#003, OsERF003, OsERF3, AP2/EREBP#012, AP2/EREBP12 | Detail |
| CX2g019796 | 2:5,240,540-5,242,820 | - | C1H2g20496 | C2H2g30620 | LOC_Os02g10770 | Os02g0201900 | - | Detail |