| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g26824 | 5:22,539,796-22,540,670 | + | C1H5g29960 | CX5g040694 | LOC_Os05g43240 | Os05g0541800 | - | Detail |
| C2H5g22825 | 5:22,541,243-22,542,775 | - | C1H5g10948 | CX5g039692 | LOC_Os05g46430 | Os05g0541900 | - | Detail |
| C2H5g27157 | 5:22,546,775-22,547,041 | - | C1H5g24953 | CX5g039049 | LOC_Os05g46440 | Os05g0542001 | - | Detail |
| C2H5g28898 | 5:22,547,597-22,550,385 | - | C1H5g29646 | CX5g040991 | LOC_Os05g46450 | Os05g0542100 | - | Detail |
| C2H5g10686 | 5:22,552,795-22,556,824 | - | C1H5g28336 | CX5g040398 | LOC_Os05g46460 | Os05g0542200 | - | Detail |
| C2H5g01306 | 5:22,562,391-22,563,212 | - | C1H5g22742 | - | LOC_Os05g46470 | Os05g0542300 | - | Detail |
| C2H5g20940 | 5:22,566,991-22,567,960 | + | C1H5g09305 | CX5g039111 | LOC_Os05g46480 | Os05g0542500 | OsLEA3-1 | Detail |
| C2H5g28006 | 5:22,570,469-22,575,907 | + | C1H5g16366 | CX5g038812 | LOC_Os05g46490 | Os05g0542600 | - | Detail |
| C2H5g00090 | 5:22,576,971-22,577,303 | + | C1H5g17509 | CX5g036843 | LOC_Os05g46500 | Os05g0542732 | - | Detail |
| C2H5g29209 | 5:22,579,557-22,582,434 | + | C1H5g04581 | CX5g038839 | LOC_Os05g46510 | Os05g0542800 | - | Detail |
| C2H5g29484 | 5:22,582,645-22,585,166 | + | C1H5g22788 | CX5g037613 | LOC_Os05g46520 | Os05g0542900 | - | Detail |
| C2H5g09269 | 5:22,587,092-22,588,125 | + | C1H5g21931 | CX5g040487 | LOC_Os05g46530 | Os05g0543000 | OSIPP3 | Detail |
| C2H5g29215 | 5:22,591,248-22,594,627 | - | C1H5g12205 | CX5g038871 | LOC_Os05g46550 | Os05g0543100 | - | Detail |
| C2H5g26031 | 5:22,595,364-22,598,453 | + | C1H5g11939 | CX5g038262 | LOC_Os05g46560 | Os05g0543200 | - | Detail |
| C2H5g16707 | 5:22,599,960-22,602,662 | + | C1H5g08116 | CX5g036803 | LOC_Os05g46570 | Os05g0543300 | - | Detail |
| C2H5g01982 | 5:22,603,608-22,606,845 | - | C1H5g14558 | CX5g038659 | LOC_Os05g46580 | Os05g0543400 | - | Detail |
| C2H5g14629 | 5:22,610,907-22,611,393 | + | C1H5g03603 | CX5g038075 | LOC_Os03g57910 | Os05g0123100 | OsGT43A | Detail |
| C2H5g18850 | 5:22,627,450-22,628,602 | + | C1H5g29668 | CX5g040628 | LOC_Os05g46610 | Os05g0543600 | RLM1 | Detail |
| C2H5g12435 | 5:22,631,435-22,634,863 | - | C1H5g30521 | CX5g039679 | LOC_Os05g46620 | Os05g0543700 | - | Detail |
| C2H5g01174 | 5:22,635,754-22,638,826 | - | C1H5g07279 | CX5g038009 | LOC_Os05g46630 | Os05g0543800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022610 | 2:5,094,685-5,096,217 | + | C1H2g29768 | C2H2g10818 | LOC_Os02g10550 | Os02g0199200 | - | Detail |
| CX2g020000 | 2:5,105,128-5,106,675 | + | C1H2g29768 | C2H2g10818 | LOC_Os02g10580 | Os02g0199200 | - | Detail |
| CX2g023351 | 2:5,107,221-5,108,955 | - | C1H2g24423 | C2H2g11987 | LOC_Os02g10590 | Os02g0199300 | - | Detail |
| CX2g022696 | 2:5,114,417-5,115,727 | + | C1H2g30492 | C2H2g02789 | LOC_Os02g10600 | Os02g0199500 | - | Detail |
| CX2g024334 | 2:5,116,299-5,117,600 | - | C1H2g18635 | C2H2g20503 | - | Os02g0199600 | - | Detail |
| CX2g019312 | 2:5,130,116-5,135,786 | - | C1H2g14720 | C2H2g05452 | LOC_Os02g10630 | Os02g0199800 | - | Detail |
| CX2g022777 | 2:5,138,006-5,142,957 | - | C1H2g22079 | C2H2g30668 | LOC_Os02g10640 | Os02g0199900 | - | Detail |
| CX2g019933 | 2:5,147,793-5,152,063 | + | C1H2g00290 | C2H2g20119 | LOC_Os02g10650 | Os02g0200000 | OsSec14-7 | Detail |
| CX2g023120 | 2:5,152,728-5,152,994 | - | C1H2g01509 | - | - | - | - | Detail |
| CX2g020248 | 2:5,155,060-5,157,042 | - | C1H2g01509 | C2H2g08800 | LOC_Os02g10660 | Os02g0200300 | - | Detail |
| CX2g024181 | 2:5,162,298-5,165,145 | + | C1H2g22046 | C2H2g20788 | LOC_Os02g10690 | Os02g0200800 | - | Detail |
| CX2g023893 | 2:5,167,278-5,169,352 | - | C1H2g10608 | C2H2g24738 | LOC_Os02g10700 | Os02g0200900 | - | Detail |
| CX2g020260 | 2:5,177,321-5,177,473 | - | - | - | - | Os02g0630650 | - | Detail |
| CX2g018996 | 2:5,180,145-5,181,361 | - | C1H2g13038 | C2H2g10447 | LOC_Os02g10710 | Os02g0758000 | - | Detail |
| CX2g021219 | 2:5,181,996-5,185,731 | - | C1H2g25618 | C2H2g27059 | LOC_Os02g10720 | Os02g0201000 | - | Detail |
| CX2g019330 | 2:5,200,168-5,200,698 | - | C1H2g23514 | C2H2g02539 | LOC_Os02g10730 | Os02g0201300 | - | Detail |
| CX2g021817 | 2:5,209,192-5,209,644 | - | - | - | - | - | - | Detail |
| CX2g020008 | 2:5,216,295-5,219,506 | - | C1H2g23712 | C2H2g22913 | LOC_Os02g10740 | Os02g0201500 | - | Detail |
| CX2g021409 | 2:5,234,604-5,235,331 | + | C1H2g24067 | C2H2g21450 | LOC_Os02g10760 | Os02g0202000 | ERF3, Os02ERF, OsSHN1, OsWR1, WR1, OsERF#003, OsERF003, OsERF3, AP2/EREBP#012, AP2/EREBP12 | Detail |
| CX2g019796 | 2:5,240,540-5,242,820 | - | C1H2g20496 | C2H2g30620 | LOC_Os02g10770 | Os02g0201900 | - | Detail |