| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g01031 | 9:14,259,818-14,260,375 | + | C2H9g21780 | CX9g058122 | LOC_Os09g24580 | Os09g0458700 | - | Detail |
| C1H9g23501 | 9:14,265,410-14,265,727 | + | - | CX9g055880 | LOC_Os09g28500 | Os09g0458800 | - | Detail |
| C1H9g27925 | 9:14,271,724-14,272,020 | + | - | CX9g057359 | LOC_Os09g28510 | Os09g0458900 | - | Detail |
| C1H9g30078 | 9:14,284,614-14,285,425 | + | C2H9g06834 | CX8g053749 | LOC_Os09g28520 | Os09g0459200 | SG1, OsSG1 | Detail |
| C1H9g30501 | 9:14,295,803-14,296,597 | - | C2H8g24284 | CX8g053292 | LOC_Os09g28550 | Os09g0459500 | - | Detail |
| C1H9g01784 | 9:14,303,871-14,308,362 | - | C2H9g17751 | CX9g056105 | LOC_Os09g28560 | Os09g0459600 | - | Detail |
| C1H9g28087 | 9:14,312,318-14,324,249 | + | C2H9g06752 | CX9g057640 | LOC_Os09g28570 | Os09g0459800 | - | Detail |
| C1H9g30852 | 9:14,324,374-14,328,346 | - | C2H9g25937 | CX9g055374 | - | - | - | Detail |
| C1H9g27185 | 9:14,325,372-14,325,692 | + | - | CX9g057488 | - | - | - | Detail |
| C1H9g15128 | 9:14,328,593-14,328,877 | - | C2H9g25937 | CX9g055374 | - | Os09g0459900 | - | Detail |
| C1H9g10045 | 9:14,336,621-14,337,228 | + | C2H8g25958 | CX9g055458 | LOC_Os09g28590 | Os09g0460000 | - | Detail |
| C1H9g20930 | 9:14,339,731-14,340,594 | + | C2H9g01353 | CX9g056394 | LOC_Os09g28600 | Os09g0460100 | - | Detail |
| C1H9g17836 | 9:14,348,465-14,358,314 | + | C2H9g17816 | CX9g055971 | LOC_Os09g28610 | Os09g0460200 | - | Detail |
| C1H9g22594 | 9:14,360,279-14,361,229 | + | C2H9g26252 | CX9g055449 | LOC_Os09g28630 | Os09g0460400 | - | Detail |
| C1H9g11334 | 9:14,362,419-14,363,357 | + | C2H9g21518 | CX9g055140 | LOC_Os09g28640 | Os09g0460500 | - | Detail |
| C1H9g08722 | 9:14,365,300-14,366,238 | + | C2H9g26252 | CX9g055140 | LOC_Os09g28650 | Os09g0460700 | - | Detail |
| C1H9g30916 | 9:14,375,244-14,376,290 | - | C2H9g05249 | CX9g055140 | LOC_Os09g28690 | Os09g0461500 | - | Detail |
| C1H9g06910 | 9:14,383,253-14,384,218 | + | C2H9g26252 | CX9g055140 | LOC_Os09g28720 | Os09g0461700 | - | Detail |
| C1H9g01019 | 9:14,385,140-14,386,243 | - | C2H9g05249 | CX9g055449 | LOC_Os09g28730 | Os09g0461900 | - | Detail |
| C1H9g16558 | 9:14,392,883-14,394,025 | + | C2H9g05249 | CX9g055140 | LOC_Os09g28740 | Os09g0462100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022610 | 2:5,094,685-5,096,217 | + | C1H2g29768 | C2H2g10818 | LOC_Os02g10550 | Os02g0199200 | - | Detail |
| CX2g020000 | 2:5,105,128-5,106,675 | + | C1H2g29768 | C2H2g10818 | LOC_Os02g10580 | Os02g0199200 | - | Detail |
| CX2g023351 | 2:5,107,221-5,108,955 | - | C1H2g24423 | C2H2g11987 | LOC_Os02g10590 | Os02g0199300 | - | Detail |
| CX2g022696 | 2:5,114,417-5,115,727 | + | C1H2g30492 | C2H2g02789 | LOC_Os02g10600 | Os02g0199500 | - | Detail |
| CX2g024334 | 2:5,116,299-5,117,600 | - | C1H2g18635 | C2H2g20503 | - | Os02g0199600 | - | Detail |
| CX2g019312 | 2:5,130,116-5,135,786 | - | C1H2g14720 | C2H2g05452 | LOC_Os02g10630 | Os02g0199800 | - | Detail |
| CX2g022777 | 2:5,138,006-5,142,957 | - | C1H2g22079 | C2H2g30668 | LOC_Os02g10640 | Os02g0199900 | - | Detail |
| CX2g019933 | 2:5,147,793-5,152,063 | + | C1H2g00290 | C2H2g20119 | LOC_Os02g10650 | Os02g0200000 | OsSec14-7 | Detail |
| CX2g023120 | 2:5,152,728-5,152,994 | - | C1H2g01509 | - | - | - | - | Detail |
| CX2g020248 | 2:5,155,060-5,157,042 | - | C1H2g01509 | C2H2g08800 | LOC_Os02g10660 | Os02g0200300 | - | Detail |
| CX2g024181 | 2:5,162,298-5,165,145 | + | C1H2g22046 | C2H2g20788 | LOC_Os02g10690 | Os02g0200800 | - | Detail |
| CX2g023893 | 2:5,167,278-5,169,352 | - | C1H2g10608 | C2H2g24738 | LOC_Os02g10700 | Os02g0200900 | - | Detail |
| CX2g020260 | 2:5,177,321-5,177,473 | - | - | - | - | Os02g0630650 | - | Detail |
| CX2g018996 | 2:5,180,145-5,181,361 | - | C1H2g13038 | C2H2g10447 | LOC_Os02g10710 | Os02g0758000 | - | Detail |
| CX2g021219 | 2:5,181,996-5,185,731 | - | C1H2g25618 | C2H2g27059 | LOC_Os02g10720 | Os02g0201000 | - | Detail |
| CX2g019330 | 2:5,200,168-5,200,698 | - | C1H2g23514 | C2H2g02539 | LOC_Os02g10730 | Os02g0201300 | - | Detail |
| CX2g021817 | 2:5,209,192-5,209,644 | - | - | - | - | - | - | Detail |
| CX2g020008 | 2:5,216,295-5,219,506 | - | C1H2g23712 | C2H2g22913 | LOC_Os02g10740 | Os02g0201500 | - | Detail |
| CX2g021409 | 2:5,234,604-5,235,331 | + | C1H2g24067 | C2H2g21450 | LOC_Os02g10760 | Os02g0202000 | ERF3, Os02ERF, OsSHN1, OsWR1, WR1, OsERF#003, OsERF003, OsERF3, AP2/EREBP#012, AP2/EREBP12 | Detail |
| CX2g019796 | 2:5,240,540-5,242,820 | - | C1H2g20496 | C2H2g30620 | LOC_Os02g10770 | Os02g0201900 | - | Detail |