| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g16031 | 12:4,495,209-4,495,847 | - | C1H12g00057 | CX12g018011 | - | - | - | Detail |
| C2H12g13338 | 12:4,504,009-4,509,180 | - | C1H12g21936 | CX12g015241 | LOC_Os12g09700 | Os12g0198700 | - | Detail |
| C2H12g07984 | 12:4,516,918-4,520,606 | + | C1H12g18620 | CX12g018163 | LOC_Os12g09710 | Os12g0198900 | - | Detail |
| C2H12g13398 | 12:4,522,686-4,525,643 | - | C1H12g20422 | CX12g016268 | LOC_Os12g09700 | Os12g0198700 | - | Detail |
| C2H12g09085 | 12:4,531,956-4,542,029 | - | C1H12g03660 | CX12g016763 | LOC_Os12g10460 | Os12g0199100 | - | Detail |
| C2H12g25382 | 12:4,561,839-4,565,485 | + | C1H12g18718 | - | - | - | - | Detail |
| C2H12g21993 | 12:4,568,789-4,571,070 | + | C1H12g29942 | CX12g015724 | LOC_Os12g10170 | Os12g0199500 | - | Detail |
| C2H12g02513 | 12:4,596,026-4,598,793 | - | C1H12g23734 | CX12g017268 | LOC_Os11g14670 | - | - | Detail |
| C2H12g06069 | 12:4,610,752-4,611,165 | - | C1H12g26851 | - | - | - | - | Detail |
| C2H12g23156 | 12:4,724,987-4,726,528 | + | C1H12g08099 | CX12g015438 | LOC_Os12g10140 | Os12g0202700 | - | Detail |
| C2H12g10521 | 12:4,727,388-4,728,439 | + | C1H12g25986 | CX12g015438 | LOC_Os12g10170 | Os12g0240900 | NOMT, OsNOMT, COMTL3, OsCOMTL3 | Detail |
| C2H12g28534 | 12:4,729,007-4,735,179 | - | C1H12g24838 | CX12g018391 | LOC_Os12g10180 | Os12g0202900 | - | Detail |
| C2H12g14596 | 12:4,736,631-4,738,688 | + | C1H12g13815 | CX12g015359 | LOC_Os12g10184 | Os12g0202850 | PGL12 | Detail |
| C2H12g19800 | 12:4,739,696-4,743,084 | + | C1H12g15070 | CX12g015359 | LOC_Os12g10190 | Os12g0203000 | - | Detail |
| C2H12g26432 | 12:4,744,095-4,746,553 | - | C1H12g07643 | CX12g015476 | LOC_Os12g10200 | Os12g0203100 | - | Detail |
| C2H12g29948 | 12:4,750,872-4,752,957 | + | C1H12g30565 | CX12g018695 | LOC_Os12g10220 | Os12g0203200 | - | Detail |
| C2H12g27282 | 12:4,780,000-4,780,482 | + | C1H12g14694 | CX12g017473 | LOC_Os12g10260 | Os12g0204000 | - | Detail |
| C2H12g03169 | 12:4,781,447-4,786,377 | + | C1H12g14346 | CX12g017473 | LOC_Os12g10270 | Os12g0632401 | - | Detail |
| C2H12g06639 | 12:4,791,041-4,794,004 | + | C1H12g25521 | CX12g015937 | LOC_Os12g10280 | Os12g0204100 | - | Detail |
| C2H12g05093 | 12:4,816,407-4,818,311 | - | C1H12g12793 | CX12g017749 | LOC_Os12g10330 | Os12g0204600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g024261 | 2:4,333,126-4,337,432 | - | C1H2g06081 | C2H2g24529 | LOC_Os02g09450 | Os02g0187400 | OsGDPDL5 | Detail |
| CX2g021982 | 2:4,340,921-4,342,880 | - | C1H2g08461 | C2H2g14677 | LOC_Os02g09460 | Os02g0187500 | - | Detail |
| CX2g023713 | 2:4,343,724-4,346,624 | + | C1H2g21086 | C2H2g21302 | LOC_Os02g09470 | Os02g0187600 | - | Detail |
| CX2g021954 | 2:4,351,821-4,352,729 | + | C1H2g14518 | C2H2g23054 | LOC_Os02g09480 | Os02g0187700 | Os2R_MYB22 | Detail |
| CX2g019349 | 2:4,354,607-4,358,365 | - | C1H2g11856 | C2H2g26222 | LOC_Os02g09490 | Os02g0187800 | - | Detail |
| CX2g022959 | 2:4,361,505-4,362,379 | - | C1H4g10643 | C2H2g19477 | LOC_Os10g11590 | - | - | Detail |
| CX2g020970 | 2:4,363,662-4,364,315 | + | - | - | - | - | - | Detail |
| CX2g020677 | 2:4,365,951-4,371,988 | - | C1H2g10627 | C2H2g19847 | LOC_Os10g10740 | - | - | Detail |
| CX2g024159 | 2:4,376,343-4,376,714 | - | C1H2g18832 | C2H2g20536 | LOC_Os02g09500 | Os02g0726400 | - | Detail |
| CX2g019535 | 2:4,383,610-4,383,834 | - | - | - | - | - | - | Detail |
| CX2g019937 | 2:4,387,520-4,388,944 | - | C1H2g07588 | C2H2g26118 | LOC_Os02g09510 | Os02g0188000 | OsSGT1 | Detail |
| CX2g020785 | 2:4,395,311-4,395,514 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g020542 | 2:4,407,612-4,409,454 | - | C1H2g13036 | C2H2g00869 | LOC_Os02g09530 | Os02g0188500 | - | Detail |
| CX2g019471 | 2:4,411,613-4,411,948 | - | C1H2g19971 | C2H2g24211 | LOC_Os02g09540 | Os02g0188600 | - | Detail |
| CX2g019440 | 2:4,415,244-4,418,215 | + | - | - | LOC_Os02g09580 | - | - | Detail |
| CX2g023837 | 2:4,418,959-4,419,944 | - | C1H2g09529 | C2H2g13432 | LOC_Os02g09590 | Os02g0189000 | - | Detail |
| CX2g021846 | 2:4,422,247-4,424,007 | - | C1H2g04316 | C2H2g28104 | LOC_Os02g09600 | Os02g0189100 | - | Detail |
| CX2g021146 | 2:4,424,871-4,426,075 | + | C1H2g15662 | C2H2g27990 | LOC_Os02g09610 | Os02g0189200 | - | Detail |
| CX2g024862 | 2:4,427,913-4,431,572 | + | C1H2g06764 | C2H2g11577 | LOC_Os02g09620 | Os02g0189300 | - | Detail |
| CX2g024704 | 2:4,432,409-4,433,432 | - | C1H2g26037 | C2H2g10166 | LOC_Os02g09630 | Os02g0189400 | - | Detail |