| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g09688 | 3:3,191,401-3,193,017 | - | C1H3g04648 | CX3g027461 | LOC_Os03g07260 | Os03g0168700 | - | Detail |
| C2H3g10633 | 3:3,194,261-3,194,461 | + | C1H3g06973 | CX3g029686 | LOC_Os03g07290 | Os03g0168900 | OsGERLP | Detail |
| C2H3g26226 | 3:3,194,544-3,196,076 | + | C1H3g26589 | CX3g029686 | LOC_Os03g07290 | Os03g0168900 | OsGERLP | Detail |
| C2H3g29541 | 3:3,197,024-3,200,400 | + | C1H3g22339 | CX3g029329 | LOC_Os03g07300 | Os03g0169100 | - | Detail |
| C2H3g19913 | 3:3,201,036-3,204,268 | - | C1H3g05071 | CX3g026826 | LOC_Os03g07310 | Os03g0169000 | - | Detail |
| C2H3g06080 | 3:3,209,799-3,218,697 | + | C1H3g30733 | CX3g027561 | LOC_Os03g07330 | Os03g0169300 | - | Detail |
| C2H3g03131 | 3:3,213,087-3,213,844 | - | C1H3g17744 | CX3g029153 | LOC_Os03g07340 | Os03g0169400 | - | Detail |
| C2H3g15611 | 3:3,224,007-3,226,727 | + | C1H3g30713 | CX3g029943 | LOC_Os03g07360 | Os03g0169600 | RDD4, OsDof12, Dof12, OsDof-12, OsCDF1, OsCDF1/OsDOF12, OsDOF12, CDF1, DOF12 | Detail |
| C2H3g04475 | 3:3,229,652-3,231,256 | - | C1H3g07573 | CX3g029455 | LOC_Os03g07370 | Os03g0169800 | WSL9 | Detail |
| C2H3g13284 | 3:3,232,972-3,235,178 | - | C1H3g28123 | CX3g026502 | LOC_Os03g07380 | Os03g0169900 | - | Detail |
| C2H3g19051 | 3:3,240,112-3,240,477 | - | C1H3g30140 | CX3g030142 | LOC_Os03g07400 | Os03g0170100 | - | Detail |
| C2H3g20350 | 3:3,243,795-3,247,329 | + | C1H3g19291 | CX3g026147 | LOC_Os03g07420 | Os03g0170300 | - | Detail |
| C2H3g22587 | 3:3,247,889-3,251,731 | - | C1H3g10171 | CX3g030033 | LOC_Os03g07430 | Os03g0170400 | OsRLCK102 | Detail |
| C2H3g17639 | 3:3,256,533-3,257,090 | - | C1H3g24740 | CX3g029150 | LOC_Os03g07440 | Os03g0170500 | - | Detail |
| C2H3g04350 | 3:3,263,703-3,266,489 | - | C1H3g30202 | CX3g026337 | LOC_Os03g07450 | Os03g0170600 | - | Detail |
| C2H3g02647 | 3:3,273,413-3,274,387 | + | C1H3g13830 | CX3g025444 | LOC_Os03g07470 | Os03g0170800 | - | Detail |
| C2H3g25317 | 3:3,276,597-3,282,402 | - | C1H3g13288 | CX3g025078 | LOC_Os03g07480 | Os03g0170900 | - | Detail |
| C2H3g26574 | 3:3,285,739-3,286,096 | + | - | - | - | Os11g0146950 | - | Detail |
| C2H3g08560 | 3:3,293,380-3,294,041 | - | C1H3g19778 | CX3g027135 | LOC_Os03g07510 | Os03g0171300 | PGL1, ILI6 | Detail |
| C2H3g08984 | 3:3,311,401-3,312,696 | + | C1H3g11183 | CX3g026056 | LOC_Os03g07530 | Os03g0171600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023298 | 2:4,029,721-4,031,815 | - | C1H2g16145 | C2H2g09386 | LOC_Os02g08520 | Os02g0182500 | - | Detail |
| CX2g022475 | 2:4,032,499-4,032,963 | - | - | - | - | - | - | Detail |
| CX2g022435 | 2:4,037,519-4,040,526 | - | C1H2g10666 | C2H2g23959 | LOC_Os02g08530 | Os02g0182600 | - | Detail |
| CX2g024002 | 2:4,051,587-4,052,057 | + | - | - | - | Os02g0778801 | - | Detail |
| CX2g023285 | 2:4,057,089-4,061,900 | + | C1H2g07899 | C2H2g22151 | LOC_Os02g08540 | Os02g0182700 | - | Detail |
| CX2g019858 | 2:4,064,778-4,067,775 | + | C1H2g19304 | C2H2g26483 | LOC_Os02g08544 | Os02g0182800 | HOS58, HOS58S | Detail |
| CX2g023048 | 2:4,069,174-4,069,485 | - | C1H2g30440 | C2H2g27479 | LOC_Os02g09050 | Os02g0182850 | - | Detail |
| CX2g023600 | 2:4,070,498-4,074,237 | - | C1H2g11349 | C2H2g14218 | LOC_Os02g09060 | Os02g0182900 | APIP10 | Detail |
| CX2g024933 | 2:4,080,398-4,081,715 | - | C1H2g30853 | C2H2g30470 | LOC_Os02g09070 | Os02g0183000 | - | Detail |
| CX2g021205 | 2:4,086,072-4,086,221 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g019455 | 2:4,089,223-4,092,283 | + | C1H2g22110 | C2H2g14504 | LOC_Os02g09080 | Os02g0183500 | - | Detail |
| CX2g020062 | 2:4,093,731-4,094,159 | + | C1H2g28242 | C2H2g21842 | LOC_Os02g09090 | - | - | Detail |
| CX2g022098 | 2:4,095,604-4,110,873 | - | C1H2g22796 | C2H2g03930 | LOC_Os02g09120 | Os02g0183900 | - | Detail |
| CX2g022231 | 2:4,112,752-4,120,417 | - | C1H2g09464 | C2H2g08015 | LOC_Os02g09130 | Os02g0184000 | - | Detail |
| CX2g022374 | 2:4,121,756-4,124,206 | + | C1H2g04783 | C2H2g08234 | LOC_Os02g09140 | - | - | Detail |
| CX2g024124 | 2:4,125,157-4,130,351 | - | C1H2g02685 | C2H2g03857 | LOC_Os02g09150 | Os02g0184200 | - | Detail |
| CX2g021779 | 2:4,138,143-4,145,472 | + | C1H2g18161 | C2H2g12249 | LOC_Os02g09170 | Os02g0184400 | - | Detail |
| CX2g024843 | 2:4,147,663-4,149,879 | + | C1H2g29318 | C2H2g09672 | LOC_Os02g09180 | Os02g0184500 | - | Detail |
| CX2g020493 | 2:4,307,348-4,310,877 | + | C1H2g02173 | C2H2g05469 | LOC_Os02g09420 | Os02g0187100 | - | Detail |
| CX2g022781 | 2:4,325,452-4,328,062 | - | C1H2g01303 | C2H2g06811 | LOC_Os02g09430 | Os02g0187200 | - | Detail |