| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g17555 | 4:19,294,120-19,296,298 | - | C1H4g19386 | CX4g031559 | LOC_Os04g37580 | Os04g0448600 | - | Detail |
| C2H4g20353 | 4:19,297,067-19,297,558 | - | C1H4g09481 | CX4g033820 | LOC_Os04g37590 | Os04g0448700 | - | Detail |
| C2H4g25051 | 4:19,299,203-19,308,979 | + | C1H4g18428 | CX4g035815 | - | - | - | Detail |
| C2H4g10467 | 4:19,310,047-19,310,754 | - | C1H4g11529 | CX4g035446 | LOC_Os04g37590 | Os04g0448700 | - | Detail |
| C2H4g23068 | 4:19,311,466-19,316,310 | + | C1H4g07540 | CX4g033552 | LOC_Os04g37600 | Os04g0448800 | - | Detail |
| C2H4g22184 | 4:19,319,086-19,319,652 | + | C1H4g29410 | CX4g031370 | LOC_Os04g37619 | Os04g0448900 | OsABA1, OsZEP | Detail |
| C2H4g04156 | 4:19,321,310-19,325,506 | + | C1H4g24442 | CX4g031370 | LOC_Os04g37619 | Os04g0448950 | - | Detail |
| C2H4g13452 | 4:19,326,093-19,328,265 | + | C1H4g20529 | - | LOC_Os04g37630 | Os04g0449000 | - | Detail |
| C2H4g00166 | 4:19,328,772-19,330,661 | - | C1H4g00476 | CX4g034821 | LOC_Os04g37640 | Os04g0449100 | - | Detail |
| C2H4g03926 | 4:19,335,058-19,337,110 | - | C1H4g27038 | CX4g034100 | LOC_Os04g37650 | Os04g0449200 | - | Detail |
| C2H4g24787 | 4:19,338,052-19,338,344 | + | C1H7g27141 | CX4g032674 | - | - | - | Detail |
| C2H4g27832 | 4:19,340,718-19,344,967 | - | C1H4g08983 | CX4g031673 | LOC_Os04g37660 | Os04g0449400 | OsPP65 | Detail |
| C2H4g17154 | 4:19,347,224-19,352,311 | - | C1H4g25897 | CX4g031811 | LOC_Os04g37670 | Os04g0449500 | - | Detail |
| C2H4g28916 | 4:19,364,622-19,368,977 | + | C1H4g29968 | CX4g036233 | LOC_Os04g37690 | Os04g0449900 | - | Detail |
| C2H4g10266 | 4:19,375,850-19,376,608 | + | C1H4g22848 | CX4g035205 | LOC_Os04g37700 | Os04g0450000 | - | Detail |
| C2H4g25343 | 4:19,379,222-19,381,671 | + | C1H4g21347 | CX4g035746 | LOC_Os04g37710 | Os04g0450100 | - | Detail |
| C2H4g21043 | 4:19,382,562-19,385,115 | + | C1H4g17181 | CX4g035241 | LOC_Os04g37720 | Os04g0450200 | - | Detail |
| C2H4g13081 | 4:19,385,945-19,387,102 | + | C1H4g23703 | CX4g034382 | LOC_Os04g37730 | Os04g0450300 | - | Detail |
| C2H4g13668 | 4:19,393,342-19,394,604 | - | C1H4g23703 | CX4g035154 | LOC_Os04g37740 | Os04g0450400 | - | Detail |
| C2H4g09550 | 4:19,395,224-19,397,802 | + | C1H4g17618 | CX4g036169 | LOC_Os04g37750 | Os04g0450500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022399 | 2:3,844,651-3,846,658 | - | C1H2g09345 | C2H2g12176 | LOC_Os02g08310 | Os02g0179400 | - | Detail |
| CX2g020585 | 2:3,853,439-3,857,402 | + | C1H2g30953 | C2H2g24288 | LOC_Os02g08320 | Os02g0179500 | - | Detail |
| CX2g020007 | 2:3,858,484-3,860,469 | - | C1H2g15298 | - | LOC_Os02g08330 | Os02g0179600 | - | Detail |
| CX2g020510 | 2:3,862,703-3,867,714 | - | C1H2g23751 | C2H2g01634 | LOC_Os02g08350 | Os02g0179800 | - | Detail |
| CX2g023636 | 2:3,869,823-3,878,213 | + | C1H2g17009 | C2H2g05800 | LOC_Os02g08360 | Os02g0179900 | - | Detail |
| CX2g023036 | 2:3,873,368-3,873,719 | - | - | - | - | Os02g0179950 | - | Detail |
| CX2g019636 | 2:3,881,555-3,884,206 | + | C1H2g04017 | C2H2g08895 | LOC_Os02g08364 | Os02g0180000 | - | Detail |
| CX2g022824 | 2:3,885,102-3,886,549 | - | C1H2g13865 | C2H2g28931 | LOC_Os02g08370 | Os02g0180100 | - | Detail |
| CX2g023398 | 2:3,889,333-3,892,535 | + | C1H2g02146 | C2H2g25419 | LOC_Os02g08380 | Os02g0180200 | LA2, LTA1 | Detail |
| CX2g022601 | 2:3,908,140-3,909,743 | + | C1H2g01164 | C2H2g28103 | LOC_Os02g08400 | Os02g0180400 | HHC2 | Detail |
| CX2g022893 | 2:3,913,167-3,915,472 | - | C1H2g08033 | C2H2g19969 | LOC_Os02g08410 | Os02g0180500 | - | Detail |
| CX2g022487 | 2:3,919,740-3,922,740 | + | C1H2g12941 | C2H2g21393 | LOC_Os02g08420 | Os02g0180700 | OsCCR21 | Detail |
| CX2g019488 | 2:3,954,898-3,955,137 | + | - | - | - | Os02g0180900 | - | Detail |
| CX2g020326 | 2:3,975,216-3,976,612 | + | C1H2g19399 | C2H2g08597 | LOC_Os02g08440 | Os02g0181300 | WRKY71, OsWRKY71 | Detail |
| CX2g018962 | 2:3,989,333-3,990,444 | + | C1H2g31251 | C2H2g13400 | LOC_Os02g08470 | Os02g0181700 | - | Detail |
| CX2g021549 | 2:3,994,499-3,996,833 | + | C1H2g13602 | C2H2g22677 | LOC_Os02g08480 | Os02g0181800 | - | Detail |
| CX2g021572 | 2:3,998,233-4,003,170 | - | C1H2g14304 | C2H2g06559 | LOC_Os02g08490 | Os02g0181900 | - | Detail |
| CX2g020537 | 2:4,004,752-4,008,725 | - | C1H2g19533 | C2H2g18423 | LOC_Os02g08500 | Os02g0182100 | RR24, OsRR24, Rrb2, Orr4, OsRR17, OsRRB2, DLC1 | Detail |
| CX2g023903 | 2:4,015,037-4,015,216 | - | - | - | - | - | - | Detail |
| CX2g019859 | 2:4,026,776-4,027,369 | - | C1H2g06188 | - | LOC_Os02g08510 | Os02g0182300 | - | Detail |